9732

Preliminary Experiences with the Uintah Framework on Intel Xeon Phi and Stampede

Qingyu Meng, Alan Humphrey, John Schmidt, Martin Berzins
Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT 84112 USA
Conference of the Extreme Science and Engineering Discovery Environment (XSEDE), 2013
@article{meng2013preliminary,

   title={Preliminary Experiences with the Uintah Framework on Intel Xeon Phi and Stampede},

   author={Meng, Qingyu and Humphrey, Alan and Schmidt, John and Berzins, Martin},

   year={2013}

}

Download Download (PDF)   View View   Source Source   

808

views

In this work, we describe our preliminary experiences on the Stampede system in the context of the Uintah Computational Framework. Uintah was developed to provide an environment for solving a broad class of fluid-structure interaction problems on structured adaptive grids. Uintah uses a combination of fluid-flow solvers and particle-based methods, together with a novel asynchronous taskbased approach and fully automated load balancing. While we have designed scalable Uintah runtime systems for large CPU core counts, the emergence of heterogeneous systems presents considerable challenges in terms of effectively utilizing additional on-node accelerators and co-processors, deep memory hierarchies, as well as managing multiple levels of parallelism. Our recent work has addressed the emergence of heterogeneous CPU/GPU systems with the design of a Unified heterogeneous runtime system, enabling Uintah to fully exploit these architectures with support for asynchronous, out-of-order scheduling of both CPU and GPU computational tasks. Using this design, Uintah has run at full scale on the Keeneland System and TitanDev. With the release of the Intel Xeon Phi co-processor and the recent availability of the Stampede system, we show that Uintah may be modified to utilize such a coprocessor based system. We also explore the different usage models provided by the Xeon Phi with the aim of understanding portability of a general purpose framework like Uintah to this architecture. These usage models range from the pragma based offload model to the more complex symmetric model, utilizing all co-processor and host CPU cores simultaneously. We provide preliminary results of the various usage models for a challenging adaptive mesh refinement problem, as well as a detailed account of our experience adapting Uintah to run on the Stampede system. Our conclusion is that while the Stampede system is easy to use, obtaining high performance from the Xeon Phi co-processors requires a substantial but different investment to that needed for GPU-based systems.
VN:F [1.9.22_1171]
Rating: 1.0/5 (1 vote cast)
Preliminary Experiences with the Uintah Framework on Intel Xeon Phi and Stampede, 1.0 out of 5 based on 1 rating

* * *

* * *

TwitterAPIExchange Object
(
    [oauth_access_token:TwitterAPIExchange:private] => 301967669-yDz6MrfyJFFsH1DVvrw5Xb9phx2d0DSOFuLehBGh
    [oauth_access_token_secret:TwitterAPIExchange:private] => o29ji3VLVmB6jASMqY8G7QZDCrdFmoTvCDNNUlb7s
    [consumer_key:TwitterAPIExchange:private] => TdQb63pho0ak9VevwMWpEgXAE
    [consumer_secret:TwitterAPIExchange:private] => Uq4rWz7nUnH1y6ab6uQ9xMk0KLcDrmckneEMdlq6G5E0jlQCFx
    [postfields:TwitterAPIExchange:private] => 
    [getfield:TwitterAPIExchange:private] => ?cursor=-1&screen_name=hgpu&skip_status=true&include_user_entities=false
    [oauth:protected] => Array
        (
            [oauth_consumer_key] => TdQb63pho0ak9VevwMWpEgXAE
            [oauth_nonce] => 1480943586
            [oauth_signature_method] => HMAC-SHA1
            [oauth_token] => 301967669-yDz6MrfyJFFsH1DVvrw5Xb9phx2d0DSOFuLehBGh
            [oauth_timestamp] => 1480943586
            [oauth_version] => 1.0
            [cursor] => -1
            [screen_name] => hgpu
            [skip_status] => true
            [include_user_entities] => false
            [oauth_signature] => mXT6RrVuPSY3KCLe+MLDJcAYkG4=
        )

    [url] => https://api.twitter.com/1.1/users/show.json
)
Follow us on Facebook
Follow us on Twitter

HGPU group

2078 peoples are following HGPU @twitter

HGPU group © 2010-2016 hgpu.org

All rights belong to the respective authors

Contact us: