high performance computing on graphics processing units: hgpu.org

Within the field of neural electrophysiology, there exists a divide between experimentalists and computational modellers. This is caused by the different spheres of expertise required to perform each discipline, as well as the differing resource requirements of the two parties. This paper considers several forms of hardware acceleration for implementation within a laboratory alongside time […]

MapReduce is a programming model that enables efficient massive data processing in large-scale computing environments such as supercomputers and clouds. Such large-scale computers employ GPUs to enjoy its good peak performance and high memory bandwidth. Since the performance of each job is depending on running application characteristics and underlying computing environments, scheduling MapReduce tasks onto […]

Suffix array is a simpler and compact alternative to the suffix tree, lexicographic name construction is the fundamental building block in suffix array construction process. This paper depicts the design issues of first data parallel implementation of the lexicographic name construction algorithm on a commodity multiprocessor GPU using the Compute Unified Device Architecture (CUDA) platform, […]

In finance, securities, such as stocks, funds, warrants and bonds, are actively traded in financial markets. Abundance of market data and accurate pricing of a security can help the practitioners arbitrage or hedge their position. It can also help researhers and traders design better trading strategies. In this work, we develop a pricing and data/information […]

Power dissipation is one of the most imminent limitation factors influencing the development of High Performance Computing (HPC). Toward power-efficient HPC on CPU-GPU hybrid platform, we are investigating software methodologies to achieve optimized power utilization by algorithm design and programming technique. In this paper we discuss power measurements of GPU, propose a method of automatic […]

This paper focuses on solving large size optimization problems using GPGPU. Evolutionary Algorithms for solving these optimization problems suffer from the curse of dimensionality, which implies that their performance deteriorates as quickly as the dimensionality of the search space increases. This difficulty makes very challenging the performance studies for very high dimensional problems. Furthermore, these […]

We present a high-performance N-body code for astronomical collisional systems accelerated with the aid of a new SIMD instruction set extension of the x86 architecture: Advanced Vector eXtensions (AVX), an enhanced version of the Streaming SIMD Extensions (SSE). With one processor core of Intel Core i7-2600 processor (8MB cache and 3.40 GHz) based on Sandy […]

The Quantization Tree algorithm has proven to be quite an efficient tool for the evaluation of financial derivatives with non-vanilla exercise rights as American-, Bermudan-or Swing options. Nevertheless, it relies heavily on a fast computation of the transition probabilities in the underlying Quantization Tree. Since this estimation is typically done by Monte-Carlo simulations, it is […]

By a rapid development of graphics processing unit (GPU), the programmability and highly parallel processing feature of GPU create a chance to allow the general purpose computation to be conducted on GPU, conventionally called GPGPU (general purpose computation on GPU). A brief survey, in particular on the rationale of how the GPU architecture leads to […]

This paper describes the development of fast Bayesian reconstruction methods for Compton cameras using commodity graphics hardware. For fast iterative reconstruction, not only is it important to increase the convergence rate, but also it is equally important to accelerate the computation of time-consuming and repeated operations, such as projection and backprojection. Since the size of […]

Data parallel architectures, such as General Purpose Graphics Units (GPGPUs) have seen a tremendous rise in their application for High End Computing. However, data movement in and out of GPGPUs remain the biggest hurdle to overall performance and programmer productivity. Applications executing on a cluster with GPUs have to manage data movement using CUDA in […]

Full resolution electron microscopic tomographic (EMT) reconstruction of large-scale tilt series requires significant computing power. The desire to perform multiple cycles of iterative reconstruction and realignment dramatically increases the pressing need to improve reconstruction performance. This has motivated us to develop a distributed multi-GPU (graphics processing unit) system to provide the required computing power for […]