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Multi-GPU Island-Based Genetic Algorithm for Solving the Knapsack Problem

Jiri Jaros

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Tags: Algorithms, Computer science, CUDA, Genetic programming, GPU cluster, MPI, nVidia, nVidia GeForce GTX 580, Package

June 26, 2012 by hgpu

CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows-Wheeler transform

Yongchao Liu, Bertil Schmidt, Douglas L. Maskell

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Tesla C2050

June 21, 2012 by hgpu

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

Rio Yokota, L. A. Barba

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Tags: Computational Physics, Computer science, CUDA, Fast multipole method, FFT, Fluid dynamics, N-body simulation, Numerical Analysis, Numerical simulation, nVidia, Package, Spectral methods, Tesla C2070, Tesla M2050

June 21, 2012 by hgpu

Towards a GPU-based Implementation of Interaction Nets

Eugen Jiresch

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Tags: Computer science, CUDA, Graph theory, nVidia, nVidia GeForce GTX 460, Package

June 20, 2012 by hgpu

GPU Computing: Image Convolution

Jan Novak, Anton Kaplanyan, Gabor Liktor, Carsten Dachsbacher

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Tags: Education, Image processing, OpenCL, Package

June 20, 2012 by hgpu

Gdev: First-Class GPU Resource Management in the Operating System

Shinpei Kato, Michael McThrow, Carlos Maltzahn, Scott Brandt

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, Operating systems, Package

June 18, 2012 by hgpu

GPUmotif: An Ultra-Fast and Energy-Efficient Motif Analysis Program Using Graphics Processing Units

Pooya Zandevakili, Ming Hu, Zhaohui Qin

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Tags: Algorithms, Biochemistry, Biology, Chemistry, Computational biology, Computer science, CUDA, Genetics, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 480, Package

June 17, 2012 by hgpu

ScatterAlloc: Massively Parallel Dynamic Memory Allocation for the GPU

Steinberger Markus, Kenzel Michael, Kainz Bernhard, Schmalstieg Dieter

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Tags: Computer science, CUDA, Hashing, Memory, nVidia, nVidia Quadro FX 6000, Package

June 16, 2012 by hgpu

Accelerating Lambert’s Problem on the GPU in MATLAB

Nathan L. Parrish

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Tags: Algorithms, Computer science, CUDA, Fortran, nVidia, nVidia GeForce GT 430, nVidia GeForce GT 540 M, nVidia GeForce GTX 560 Ti, Package

June 16, 2012 by hgpu

Parallel Primitives based Spatial Join of Geospatial Data on GPGPUs

Jianting Zhang

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Tags: Algorithms, Computer science, CUDA, Data parallelism, Databases, nVidia, nVidia Quadro FX 6000, Package

June 16, 2012 by hgpu

Large, Pruned or Continuous Space Language Models on a GPU for Statistical Machine Translation

Holger Schwenk, Anthony Rousseau, Mohammed Attik

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Tags: Computational Complexity, Computer science, CUDA, nVidia, nVidia GeForce GTX 580, Package, Speech recognition, Tesla M2090

June 11, 2012 by hgpu

GPUSync: Architecture-Aware Management of GPUs for Predictable Multi-GPU Real-Time Systems

Glenn A. Elliott, Bryan C. Ward, James H. Anderson

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 470, Package, Performance

June 11, 2012 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

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high performance computing on graphics processing units: hgpu.org

Packages

Multi-GPU Island-Based Genetic Algorithm for Solving the Knapsack Problem

CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows-Wheeler transform

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

Towards a GPU-based Implementation of Interaction Nets

GPU Computing: Image Convolution

Gdev: First-Class GPU Resource Management in the Operating System

GPUmotif: An Ultra-Fast and Energy-Efficient Motif Analysis Program Using Graphics Processing Units

ScatterAlloc: Massively Parallel Dynamic Memory Allocation for the GPU

Accelerating Lambert’s Problem on the GPU in MATLAB

Parallel Primitives based Spatial Join of Geospatial Data on GPGPUs

Large, Pruned or Continuous Space Language Models on a GPU for Statistical Machine Translation

GPUSync: Architecture-Aware Management of GPUs for Predictable Multi-GPU Real-Time Systems

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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