high performance computing on graphics processing units: hgpu.org

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Parallel mutual information estimation for inferring gene regulatory networks on GPUs

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

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Tags: Algorithms, Biology, Computational biology, CUDA, Image processing, Machine learning, nVidia, Package, Tesla C2050

January 13, 2012 by hgpu

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Peng Jia, Liming Xuan, Lei Liu, Chaochun Wei

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Tags: Biology, Computational biology, CUDA, Genetics, nVidia, Package, Tesla C1060

January 11, 2012 by hgpu

Report on the Feasibility of Implementing PIC Codes on a GPU

Joshua Payne

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Tags: CUDA, nVidia, nVidia GeForce GTX 470, Package, Physics, Plasma physics

January 7, 2012 by hgpu

CodePy

Martin Kempf

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Tags: Code generation, Computer science, CUDA, nVidia, Package, Python

January 6, 2012 by hgpu

A GPU Implementation of Inclusion-based Points-to Analysis

Mario Mendez-Lojo, Martin Burtscher, Keshav Pingali

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Tags: Algorithms, Computer science, CUDA, Graph theory, nVidia, Package, Performance, Programming techniques, Tesla C2070

January 5, 2012 by hgpu

Implementation of Keccak hash function in Tree hashing mode on Nvidia GPU

Guillaume Sevestre

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce GTS 250, nVidia Quadro FX 370 M, Optimization, Package, Security, Stream Ciphers

January 5, 2012 by hgpu

Thermal and Athermal Swarms of Self-Propelled Particles

Nguyen Nguyen, Eric Jankowski, Sharon C. Glotzer

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Tags: Computational Physics, Condensed matter, CUDA, nVidia, Package, Physics, Probability, Soft Condensed Matter, Tesla S1070

January 4, 2012 by hgpu

Augmenting Operating Systems With the GPU

Weibin Sun, Robert Ricci

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, Operating systems, Package

January 2, 2012 by hgpu

Efficient Triangle and Quadrilateral Clipping within Shaders

M. McGuire

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Tags: Algorithms, Computer science, GLSL, nVidia, nVidia GeForce GTX 580, OpenGL, Optimization, Package, Rasterization

December 31, 2011 by hgpu

Fast Speaker Diarization Using a Specialization Framework for Gaussian Mixture Model Training

Ekaterina Gonina

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Tags: Acoustics, Algorithms, Clustering, Computer science, CUDA, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package, Python, Thesis

December 31, 2011 by hgpu

Fast K-selection Algorithms for Graphics Processing Units

Tolu Alabi, Jeffrey D. Blanchard, Bradley Gordon, Russel Steinbach

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Tags: Algorithms, Computer science, CUDA, Mathematical Software, nVidia, Package, Sorting, Tesla C2070

December 31, 2011 by hgpu

A 3D Convex Hull Algorithm for Graphics Hardware

Mingcen Gao, Thanh-Tung Cao, Tiow-Seng Tan, Zhiyong Huang

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 460, OpenGL, Package, Voronoi diagram

December 31, 2011 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

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high performance computing on graphics processing units: hgpu.org

Packages

Parallel mutual information estimation for inferring gene regulatory networks on GPUs

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Report on the Feasibility of Implementing PIC Codes on a GPU

CodePy

A GPU Implementation of Inclusion-based Points-to Analysis

Implementation of Keccak hash function in Tree hashing mode on Nvidia GPU

Thermal and Athermal Swarms of Self-Propelled Particles

Augmenting Operating Systems With the GPU

Efficient Triangle and Quadrilateral Clipping within Shaders

Fast Speaker Diarization Using a Specialization Framework for Gaussian Mixture Model Training

Fast K-selection Algorithms for Graphics Processing Units

A 3D Convex Hull Algorithm for Graphics Hardware

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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