high performance computing on graphics processing units: hgpu.org

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hgpu.org » Applications

GPU-based Video Feature Tracking and Matching

Sudipta N. Sinha, Jan-michael Frahm, Marc Pollefeys, Yakup Genc

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Tags: Computer science, Image processing, nVidia, nVidia GeForce 7900 GTX, OpenGL, Package, SIFT

October 29, 2010 by hgpu

The Heisenberg spin glass model on GPU: myths and actual facts

M. Bernaschi, G. Parisi, L. Parisi

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Tags: Condensed matter, CUDA, Disordered Systems and Neural Networks, nVidia, nVidia GeForce GTX 480, Package, Physics, Spin Systems, Tesla C1060, Tesla C2050

October 28, 2010 by hgpu

CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment

Svetlin Manavski, Giorgio Valle

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Tags: Bioinformatics, Biology, Computational biology, Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Smith-Waterman algorithm

October 28, 2010 by hgpu

GpuCV: A GPU-Accelerated Framework for Image Processing and Computer Vision

Yannick Allusse, Patrick Horain, Ankit Agarwal, Cindula Saipriyadarshan

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Tags: Computer science, Computer vision, CUDA, GLSL, Image processing, nVidia, nVidia GeForce GTX 280, OpenGL, Package

October 28, 2010 by hgpu

The gputools package enables GPU computing in R

Joshua Buckner, Justin Wilson, Mark Seligman, Brian Athey, Stanley Watson, Fan Meng

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Tags: Computer science, CUBLAS, CUDA, nVidia, Package

October 28, 2010 by hgpu

High performance cellular level agent-based simulation with FLAME for the GPU

Paul Richmond, Dawn Walker, Simon Coakley, Daniela Romano

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Tags: Bioinformatics, Cellular modelling, Computational modelling, Computer science, CUDA, nVidia, Package

October 28, 2010 by hgpu

CrystalGPU: Transparent and Efficient Utilization of GPU Power

Abdullah Gharaibeh, Samer Al-Kiswany, Matei Ripeanu

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 9800 GX2, Package, Performance

October 28, 2010 by hgpu

MinGPU: a minimum GPU library for computer vision

Pavel Babenko, Mubarak Shah

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Tags: Computer science, Computer vision, Homography transformation, nVidia, OpenGL, Package

October 27, 2010 by hgpu

On GPU’s viability as a middleware accelerator

Samer A. Kiswany, Abdullah Gharaibeh, Elizeu S. Neto, Matei Ripeanu

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce 8600 GTS, nVidia GeForce 8800 GTX, Package, Storage system

October 27, 2010 by hgpu

Sequence alignment with GPU: Performance and design challenges

Gregory M. Striemer, Ali Akoglu

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Tags: Bioinformatics, Biology, Computational biology, Computer science, CUDA, nVidia, Package, Sequence alignment, Smith-Waterman algorithm, Tesla C870

October 27, 2010 by hgpu

GPU-Quicksort: A practical Quicksort algorithm for graphics processors

Daniel Cederman, Philippas Tsigas

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Tags: Algorithms, Computer science, CUDA, Data Structures and Algorithms, nVidia, nVidia GeForce 8600 GTS, nVidia GeForce 8800 GTX, Package, Sorting

October 27, 2010 by hgpu

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

M. J. Harvey, G. Giupponi, G. De Fabritiis

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Tags: Biological Physics, Chemistry, Computational Physics, CUDA, GPU cluster, Molecular dynamics, nVidia, nVidia GeForce GTX 280, Package, Physics, Tesla C1060

October 27, 2010 by hgpu

HPCToolkit

Refining HPCToolkit for application performance analysis at exascale

Open Catalog of Best Practices for Modernization and Optimization

Optimizing the Weather Research and Forecasting Model with OpenMP Offload and Codee

Owl: Differential-based Side-Channel Leakage Detection for CUDA Applications

pSTL-Bench: Micro-benchmark suite designed to evaluate the scalability and efficiency of parallel C++ STL implementations

Exploring Scalability in C++ Parallel STL Implementations

GPU-Smash: Compression abstraction library

A Parallel Compression Pipeline for Improving GPU Virtualization Data Transfers

Noarr Structures

Abstractions for C++ code optimizations in parallel high-performance applications

$3D-fractal-generators$

HiCCL: A hierarchical collective communications library with portable optimizations

HiCCL: A Hierarchical Collective Communication Library

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high performance computing on graphics processing units: hgpu.org

Packages

GPU-based Video Feature Tracking and Matching

The Heisenberg spin glass model on GPU: myths and actual facts

CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment

GpuCV: A GPU-Accelerated Framework for Image Processing and Computer Vision

The gputools package enables GPU computing in R

High performance cellular level agent-based simulation with FLAME for the GPU

CrystalGPU: Transparent and Efficient Utilization of GPU Power

MinGPU: a minimum GPU library for computer vision

On GPU’s viability as a middleware accelerator

Sequence alignment with GPU: Performance and design challenges

GPU-Quicksort: A practical Quicksort algorithm for graphics processors

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

Recent source codes

HPCToolkit

Open Catalog of Best Practices for Modernization and Optimization

Owl: Differential-based Side-Channel Leakage Detection for CUDA Applications

pSTL-Bench: Micro-benchmark suite designed to evaluate the scalability and efficiency of parallel C++ STL implementations

GPU-Smash: Compression abstraction library

Noarr Structures

3D-fractal-generators

SyncPerformance

VerCors: a verification toolset for verifying parallel and concurrent software

HiCCL: A hierarchical collective communications library with portable optimizations

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