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CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: application to proteins

Jan Busa Jr., Jan Busa, Shura Hayryan, Chin-Kun Hu, Ming-Chya Wu

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Tags: Algorithms, Biology, Computer physics, Fortran, nVidia, nVidia GeForce GTX 470, OpenCL, Physics, Tesla C1060

February 10, 2015 by hgpu

GPU-based acceleration of free energy calculations in solid state physics

Michal Januszewski, Andrzej Ptok, Dawid Crivelli, Bartlomiej Gardas

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Tags: Algorithms, Computational Physics, CUDA, Fortran, nVidia, Physics, Tesla K40

January 2, 2015 by hgpu

Extending OmpSs to support CUDA and OpenCL in C, C++ and Fortran Applications

Florentino Sainz, Sergi Mateo, Vicenc Beltran, Jose L. Bosque, Xavier Martorell, Eduard Ayguade

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Tags: Computer science, CUDA, Fortran, nVidia, OpenCL, Tesla M2050

December 30, 2014 by hgpu

Analysis of GPU-based convolution for acoustic wave propagation modeling with finite differences: Fortran to CUDA-C step-by-step

Makoto Sadahiro

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Tags: Acoustics, CUDA, Finite difference, Fortran, nVidia, Physics, Tesla K20, Thesis

September 13, 2014 by hgpu

A Validation Testsuite for OpenACC 1.0

Cheng Wang, Rengan Xu, Sunita Chandrasekaran, Barbara Chapman, Oscar Hernandez

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Tags: Compilers, Computer science, Fortran, nVidia, OpenACC, Tesla K20

September 9, 2014 by hgpu

Porting NAHUJ to CUDA

Evghenii Gaburov

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Tags: CUDA, Fluid dynamics, Fortran, nVidia, Tesla K20

May 16, 2014 by hgpu

Petascale computations for Large-scale Atomic and Molecular collisions

Brendan M McLaughlin, Connor P Ballance

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Tags: BLAS, Computational Physics, Computer science, CUDA, Fortran, Molecular simulation, MPI, nVidia, Tesla K20

April 4, 2014 by hgpu

XeonPhi Meets Astrophysical Fluid Dynamics

Evghenii Gaburov, Yuri Cavecchi

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Tags: Astrophysics, Fluid dynamics, Fortran, Intel Xeon Phi

March 9, 2014 by hgpu

Towards Porting a Real-World Seismological Application to the Intel MIC Architecture

V. Weinberg, M. Allalen, G. Brietzke

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Tags: Earth and Space Sciences, Fortran, Geoscience, Heterogeneous systems, Intel Xeon Phi, MPI, Seismology

February 16, 2014 by hgpu

GPU-Accelerated parallel FDTD on Distributed Heterogeneous Platform

Ronglin Jiang, Shugang Jiang, Yu Zhang, Ying Xu, Lei Xu, Dandan Zhang

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Tags: CUDA, Electrodynamics, FDTD, Finite-difference time-domain, Fortran, Heterogeneous systems, MPI, nVidia, Tesla K20

January 12, 2014 by hgpu

Nemo: A parallelized Lagrangian particle-tracking model

Benjamin Jones

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Source codes

Tags: CUDA, Earth and Space Sciences, Fortran, MPI, nVidia, nVidia GeForce GTX 650 M, Package

January 3, 2014 by hgpu

Experiences Porting a Molecular Dynamics Code to GPUs on a Cray XK7

Donald K. Berry, Joseph Schuchart, Robert Henschel

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Tags: CUDA, Fortran, Molecular dynamics, MPI, nVidia, OpenACC, Physics, Tesla K20

December 19, 2013 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: application to proteins

GPU-based acceleration of free energy calculations in solid state physics

Extending OmpSs to support CUDA and OpenCL in C, C++ and Fortran Applications

Analysis of GPU-based convolution for acoustic wave propagation modeling with finite differences: Fortran to CUDA-C step-by-step

A Validation Testsuite for OpenACC 1.0

Porting NAHUJ to CUDA

Petascale computations for Large-scale Atomic and Molecular collisions

XeonPhi Meets Astrophysical Fluid Dynamics

Towards Porting a Real-World Seismological Application to the Intel MIC Architecture

GPU-Accelerated parallel FDTD on Distributed Heterogeneous Platform

Nemo: A parallelized Lagrangian particle-tracking model

Experiences Porting a Molecular Dynamics Code to GPUs on a Cray XK7

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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