high performance computing on graphics processing units: hgpu.org

Jairo Panetta, Thiago Teixeira, Paulo R. P. de Souza Filho, Carlos A. da Cunha Finho, David Sotelo, Fernando M. da Motta, Silvio S. Pinheiro, Ivan P. Junior, Andre L. Rosa, Luiz R. Monnerat, Leandro T. Carneiro, Carlos H. B. de Albrecht

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Tags: CUDA, Geoscience, GPU cluster, nVidia, Physics, Tesla C1060

October 28, 2010 by hgpu

Adapting a message-driven parallel application to GPU-accelerated clusters

James C. Phillips, John E. Stone, Klaus Schulten

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Tags: Computer science, CUDA, GPU cluster, Molecular dynamics, nVidia, nVidia Quadro FX 5600

October 28, 2010 by hgpu

GAMER: a GPU-Accelerated Adaptive Mesh Refinement Code for Astrophysics

Hsi-Yu Schive, Yu-Chih Tsai, Tzihong Chiueh

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Tags: Astrophysics, Cosmology and Extragalactic Astrophysics, CUDA, GPU cluster, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia

October 28, 2010 by hgpu

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

M. J. Harvey, G. Giupponi, G. De Fabritiis

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Tags: Biological Physics, Chemistry, Computational Physics, CUDA, GPU cluster, Molecular dynamics, nVidia, nVidia GeForce GTX 280, Package, Physics, Tesla C1060

October 27, 2010 by hgpu

GPU Cluster for High Performance Computing

Zhe Fan, Feng Qiu, A. Kaufman, S. Yoakum-Stover

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Tags: Computer science, Fluid dynamics, GPU cluster, Lattice Boltzmann model, nVidia, nVidia GeForce FX 5800 Ultra

October 27, 2010 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

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high performance computing on graphics processing units: hgpu.org

Biomolecular electrostatics simulation with a parallel FMM-based BEM, using up to 512 GPUs

Exploring the multiple-GPU design space

GAMER with out-of-core computation

Implementation of a Lattice–Boltzmann method for numerical fluid mechanics using the nVIDIA CUDA technology

General purpose molecular dynamics simulations fully implemented on graphics processing units

High-order finite-element seismic wave propagation modeling with MPI on a large GPU cluster

AUTO-GC: Automatic translation of data mining applications to GPU clusters

Accelerating Kirchhoff Migration by CPU and GPU Cooperation

Adapting a message-driven parallel application to GPU-accelerated clusters

GAMER: a GPU-Accelerated Adaptive Mesh Refinement Code for Astrophysics

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

GPU Cluster for High Performance Computing

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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