high performance computing on graphics processing units: hgpu.org

hgpu.org » Medicine

Real-time medical video processing, enabled by hardware accelerated correlations

Thiusius Savarimuthu, Anders Kjaer-Nielsen, Anders Sorensen

Tags: FPGA, Image processing, Image recognition, Medicine

January 14, 2011 by hgpu

Cardiac simulation on multi-GPU platform

Venkata Nimmagadda, Ali Akoglu, Salim Hariri, Talal Moukabary

Tags: GPU cluster, Medicine, PDEs

January 13, 2011 by hgpu

Automatic Hepatic Vessel Segmentation Using Graphics Hardware

Marius Erdt, Matthias Raspe, Michael Suehling

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Tags: Computed tomography, CT, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTS

January 12, 2011 by hgpu

CUDA-based real time surgery simulation

Youquan Liu, Suvranu De

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Tags: CUDA, Medicine, nVidia, nVidia GeForce 8800 GTX, Surgical simulation

January 11, 2011 by hgpu

Techniques for efficient, real-time, 3D visualization of multi-modality cardiac data using consumer graphics hardware

David Levin, Usaf Aladl, Guido Germano, Piotr Slomka

Tags: ATI, ATI Radeon 9700 Pro, Computed tomography, CT, Image processing, Medicine, MRI, Rendering, Visualization

January 8, 2011 by hgpu

GPUMCD: a new GPU-oriented Monte Carlo dose calculation platform

Sami Hissoiny, Hugo Bouchard, Benoit Ozell, Philippe Despres

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Tags: CUDA, Medical Physics, Medicine, Monte Carlo simulation, nVidia, nVidia GeForce GTX 480, Radiotherapy

January 8, 2011 by hgpu

Fully-3D GPU PET reconstruction

J. L. Herrai, S. Espana, J. Cal-Gonzalez, J. J. Vaquero, M. Desco, J. M. Udias

Tags: Computed tomography, CT, Image processing, Image reconstruction, Medicine

January 6, 2011 by hgpu

Sinus Endoscopy – Application of Advanced GPU Volume Rendering for Virtual Endoscopy

Arno Kruger, Christoph Kubisch, Bernhard Preim, Gero Strauss

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Tags: Cg, Medicine, nVidia, nVidia GeForce 8600 GS, OpenGL, Rendering, Visualization

January 2, 2011 by hgpu

GPU Accelerated Image Registration in Two and Three Dimensions

Alexander Kohn, Johann Drexl, Felix Ritter, M. Konig, H.O.Peitge

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Tags: GLSL, Image processing, Image registration, Medicine, nVidia, nVidia GeForce 6800, nVidia GeForce 6800 GT, OpenGL

December 29, 2010 by hgpu

Single-particle 3D reconstruction from cryo-electron microscopy images on GPU

Guangming Tan, Ziyu Guo, Mingyu Chen, Dan Meng

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Tags: CUDA, Electron microscopy, Image processing, Image reconstruction, Medicine, nVidia, nVidia GeForce 8800 GTX

December 29, 2010 by hgpu

Multi GPU Implementation of Iterative Tomographic Reconstruction Algorithms

Byunghyun Jang, David R. Kaeli, Synho Do, Homer Pien

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Tags: Computed tomography, CT, CUDA, GPU cluster, Image processing, Image reconstruction, Medicine, nVidia, Tesla S870

December 26, 2010 by hgpu

The GPU on biomedical image processing for color and phenotype analysis

Antonio Ruiz, Manuel Ujaldon, Jose Antonio Andrade

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Tags: Bioinformatics, Image processing, Medicine, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce 7800 GTX, OpenGL

December 24, 2010 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

Real-time medical video processing, enabled by hardware accelerated correlations

Cardiac simulation on multi-GPU platform

Automatic Hepatic Vessel Segmentation Using Graphics Hardware

CUDA-based real time surgery simulation

Techniques for efficient, real-time, 3D visualization of multi-modality cardiac data using consumer graphics hardware

GPUMCD: a new GPU-oriented Monte Carlo dose calculation platform

Fully-3D GPU PET reconstruction

Sinus Endoscopy – Application of Advanced GPU Volume Rendering for Virtual Endoscopy

GPU Accelerated Image Registration in Two and Three Dimensions

Single-particle 3D reconstruction from cryo-electron microscopy images on GPU

Multi GPU Implementation of Iterative Tomographic Reconstruction Algorithms

The GPU on biomedical image processing for color and phenotype analysis

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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