high performance computing on graphics processing units: hgpu.org

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GPU-based Monte Carlo simulation for light propagation in complex heterogeneous tissues

Nunu Ren, Jimin Liang, Xiaochao Qu, Jianfeng Li, Bingjia Lu, Jie Tian

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Source codes

Tags: CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 260, Optics, Package, Physics

December 17, 2010 by hgpu

Programming massively parallel processors : A Hands – on approach

David B Kirk and Wen-Mei W. Hwu

Tags: Algorithms, Book, Computer science, CUDA, nVidia, OpenCL, Review

December 17, 2010 by hgpu

Accelerating Correlated Quantum Chemistry Calculations Using Graphical Processing Units

Mark Watson, Roberto Olivares-Amaya, Richard G. Edgar, Alan Aspuru-Guzik

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Tags: Chemistry, Computational chemistry, Molecular modeling, nVidia, Tesla C1060

December 17, 2010 by hgpu

A GPU solvent-solvent interaction calculation accelerator for biomolecular simulations using the GROMOS software

Nathan Schmid, Mathias Botschi, Wilfred F. Van Gunsteren

Tags: Chemistry, Computational chemistry, CUDA, Molecular dynamics, nVidia, nVidia Quadro FX 5800, Solvent effects

December 17, 2010 by hgpu

Molecular Dynamics on a Grand Scale

Matthew James Mawson Breeze

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Tags: ATI, ATI Radeon X1600, Chemistry, GLSL, Molecular dynamics, nVidia, nVidia GeForce 6200, nVidia GeForce 8800 GTS, OpenGL, Thesis

December 17, 2010 by hgpu

Accelerating Monte Carlo simulations with an NVIDIA graphics processor

Paul Martinsen, Johannes Blaschke, Rainer Kunnemeyer and Robert Jordan

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Tags: CUDA, Monte Carlo simulation, nVidia, nVidia GeForce 8800 GT, Physics

December 16, 2010 by hgpu

Real-time optical micro-manipulation using optimized holograms generated on the GPU

S. Bianchi, R. Di Leonardo

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Tags: Computer holography, CUDA, nVidia, nVidia GeForce GTX 260, Optics, Physics

December 16, 2010 by hgpu

GPU Acceleration of an Unmodified Parallel Finite Element Navier-Stokes Solver

Dominik Goddeke, Sven H.M. Buijssen, Hilmar Wobker and Stefan Turek

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Tags: CUDA, Finite element method, Fluid dynamics, GPU cluster, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 8800 GTX

December 16, 2010 by hgpu

Fast and Accurate Finite-Element Multigrid Solvers for PDE Simulations on GPU Clusters

Dominik Goddeke

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Tags: CUDA, Finite element method, Fluid dynamics, GPU cluster, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 6800, nVidia GeForce 7600 GT, nVidia GeForce 7900 GT, nVidia GeForce 8600 GT, nVidia GeForce 8800 GTX, nVidia GeForce 9600 GT, nVidia GeForce GTX 280, OpenGL, Review, Thesis

December 16, 2010 by hgpu

Exploring weak scalability for FEM calculations on a GPU-enhanced cluster

Dominik Goddeke, Robert Strzodka, Jamaludin Mohd-Yusof, Patrick McCormick, Sven H.M. Buijssen, Matthias Grajewski and Stefan Turek

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Tags: Computer science, Finite element method, GPU cluster, MPI, nVidia, nVidia Quadro FX 5600

December 16, 2010 by hgpu

High-throughput Bayesian network learning using heterogeneous multicore computers

Michael D. Linderman, Robert Bruggner, Vivek Athalye, Teresa H. Meng, Narges B. Asadi, Garry P. Nolan

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Tags: Algorithms, CUDA, GPU cluster, Mathematics, nVidia, nVidia GeForce GTX 285, Statistics, Tesla C1060, Tesla S1070

December 15, 2010 by hgpu

Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms

Scott Christley, Briana Lee, Xing Dai, Qing Nie

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Tags: Biology, CUDA, nVidia, nVidia GeForce GTX 285

December 15, 2010 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

GPU-based Monte Carlo simulation for light propagation in complex heterogeneous tissues

Programming massively parallel processors : A Hands – on approach

Accelerating Correlated Quantum Chemistry Calculations Using Graphical Processing Units

A GPU solvent-solvent interaction calculation accelerator for biomolecular simulations using the GROMOS software

Molecular Dynamics on a Grand Scale

Accelerating Monte Carlo simulations with an NVIDIA graphics processor

Real-time optical micro-manipulation using optimized holograms generated on the GPU

GPU Acceleration of an Unmodified Parallel Finite Element Navier-Stokes Solver

Fast and Accurate Finite-Element Multigrid Solvers for PDE Simulations on GPU Clusters

Exploring weak scalability for FEM calculations on a GPU-enhanced cluster

High-throughput Bayesian network learning using heterogeneous multicore computers

Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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