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GPU-based Cloud Computing for Comparing the Structure of Protein Binding Sites

Matthias Leinweber, Lars Baumgartner, Marco Mernberger, Thomas Fober, Eyke Hullermeier, Gerhard Klebe, Bernd Freisleben

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Tags: Biology, Java, Macromolecule, nVidia, nVidia GeForce GTX 580, OpenCL, Tesla M2050

June 26, 2012 by hgpu

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

Rio Yokota, L. A. Barba

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Source codes

Tags: Computational Physics, Computer science, CUDA, Fast multipole method, FFT, Fluid dynamics, N-body simulation, Numerical Analysis, Numerical simulation, nVidia, Package, Spectral methods, Tesla C2070, Tesla M2050

June 21, 2012 by hgpu

OpenCL for programming shared memory multicore CPUs

Akhtar Ali, Usman Dastgeer, Christoph Kessler

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Tags: Computer science, Heterogeneous systems, nVidia, OpenCL, Performance, Tesla M2050

June 18, 2012 by hgpu

Scaling Fast Multipole Methods up to 4000 GPUs

Rio Yokota, Lorena Barba, Tetsu Narumi, Kenji Yasuoka

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Tags: Algorithms, Computer science, CUDA, Fast multipole method, MPI, N-body simulation, nVidia, Tesla M2050

June 9, 2012 by hgpu

Massively Parallel Neural Encoding and Decoding of Visual Stimuli

Aurel A. Lazar, Yiyin Zhou

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Tags: Algorithms, Computer science, CUDA, GPU cluster, Neural networks, nVidia, Tesla M2050

May 29, 2012 by hgpu

Real-Time Systems with Radiation-Hardened Processors: A GPU-based Framework to Explore Tradeoffs

Mohammad Alhowaidi

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Tags: Computer science, nVidia, OpenCL, Sensing, Tesla M2050, Thesis

May 19, 2012 by hgpu

A GPU-Accelerated Algorithm for Self-Organizing Maps in a Distributed Environment

Peter Wittek, Sandor Daranyi

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Tags: Algorithms, Computer science, CUDA, MapReduce, nVidia, Package, Self-organizing map, Tesla M2050

May 10, 2012 by hgpu

Design of a Hybrid Memory System for General-Purpose Graphics Processing Units

Patrick Carpenter

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Tags: Computer science, CUDA, Memory model, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 470, nVidia GeForce GTX 480, Tesla C2070, Tesla M2050, Thesis

May 6, 2012 by hgpu

Paraiso : An Automated Tuning Framework for Explicit Solvers of Partial Differential Equations

Takayuki Muranushi

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Tags: Algorithms, Astrophysics, CUDA, Differential equations, Instrumentation and Methods for Astrophysics, nVidia, Package, Partial differential equations, PDEs, Tesla M2050

April 25, 2012 by hgpu

Software Model Checking for GPGPU Programs, Towards a Verification Tool

Unmesh Bordoloi, Ahmed Rezine

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Tags: Algorithms, Computer science, CUDA, nVidia, Tesla M2050

April 13, 2012 by hgpu

Writing a modular GPGPU program in Java

Masayuki Ioki, Shumpei Hozumi, Shigeru Chiba

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Tags: Computer science, CUDA, Fortran, Java, nVidia, Tesla M2050

April 13, 2012 by hgpu

Accelerating the FDTD Method Using SSE and Graphics Processing Units

Matthew J. Livesey

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Tags: Computer science, CUDA, Data parallelism, FDTD, Finite-difference time-domain, nVidia, Tesla M2050, Tesla T10, Thesis

March 28, 2012 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

* * *

high performance computing on graphics processing units: hgpu.org

GPU-based Cloud Computing for Comparing the Structure of Protein Binding Sites

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

OpenCL for programming shared memory multicore CPUs

Scaling Fast Multipole Methods up to 4000 GPUs

Massively Parallel Neural Encoding and Decoding of Visual Stimuli

Real-Time Systems with Radiation-Hardened Processors: A GPU-based Framework to Explore Tradeoffs

A GPU-Accelerated Algorithm for Self-Organizing Maps in a Distributed Environment

Design of a Hybrid Memory System for General-Purpose Graphics Processing Units

Paraiso : An Automated Tuning Framework for Explicit Solvers of Partial Differential Equations

Software Model Checking for GPGPU Programs, Towards a Verification Tool

Writing a modular GPGPU program in Java

Accelerating the FDTD Method Using SSE and Graphics Processing Units

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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