GPU Based Parallel Computing on Blast Program

Huang Lican, Hu Ya
Coll. of Inf. & Electron., Zhejiang Sci-Tech Univ., Hangzhou, China
First International Conference on Networking and Distributed Computing (ICNDC), 2010


   title={GPU Based Parallel Computing on Blast Program},

   author={Lican, H. and Ya, H.},

   booktitle={Networking and Distributed Computing (ICNDC), 2010 First International Conference on},





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Sequence alignment is one of the most fundamental and important operation in Bioinformatics. Among lots of Sequence alignment tools, Blast is one of the most popular algorithms. In this paper, we describe the primary strategy of a GPU-based parallel computing on Blast program.
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