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The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

Timothée David--Cléris, Guillaume Laibe, Yona Lapeyre

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Tags: AMD, AMD Radeon Instinct MI250X, Astrophysics, CUDA, MPI, nVidia, nVidia A100, OpenMP, Package, Physics, PTX, ROCm, SYCL

March 23, 2025 by hgpu

Performant Automatic BLAS Offloading on Unified Memory Architecture with OpenMP First-Touch Style Data Movement

Junjie Li

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Tags: Computer science, CUDA, HPC, Linear Algebra, nVidia, nVidia GH200, OpenMPI, Physics, Quantum Physics

January 6, 2025 by hgpu

A comparison of HPC-based quantum computing simulators using Quantum Volume

Lourens van Niekerk, Dhiraj Kumar, Aasish Kumar Sharma, Tino Meisel, Martin Leandro Paleico, Christian Boehme

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Tags: Benchmarking, CUDA, nVidia, nVidia A100, OpenCL, Overview, Physics, Quantum computing, Review

January 6, 2025 by hgpu

Asynchronous-Many-Task Systems: Challenges and Opportunities – Scaling an AMR Astrophysics Code on Exascale machines using Kokkos and HPX

Gregor Daiß, Patrick Diehl, Jiakun Yan, John K. Holmen, Rahulkumar Gayatri, Christoph Junghans, Alexander Straub, Jeff R. Hammond, Dominic Marcello, Miwako Tsuji, Dirk Pflüger, Hartmut Kaiser

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Tags: AMD Radeon Instinct MI100, AMD Radeon Instinct MI250X, Astrophysics, ATI, Computer science, CUDA, Heterogeneous systems, HIP, HPC, nVidia, nVidia A100, Package, performance portability, Physics

December 29, 2024 by hgpu

TorchQC – A framework for efficiently integrating machine and deep learning methods in quantum dynamics and control

Dimitris Koutromanos, Dionisis Stefanatos, Emmanuel Paspalakis

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Tags: Deep learning, Machine learning, Package, Physics, Python, PyTorch, Quantum Physics

December 29, 2024 by hgpu

CLUEstering: a high-performance density-based clustering library for scientific computing

Simone Balducci

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Tags: Astrophysics, ATI, Clustering, CUDA, FPGA, HIP, Machine learning, nVidia, Package, performance portability, Physics, Python, Tesla T4, Thesis

December 1, 2024 by hgpu

Scaling SU(2) to 1000 GPUs using HiRep

Sofie Martins, Erik Kjellgren, Emiliano Molinaro, Claudio Pica, Antonio Rago

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Tags: AMD Radeon Instinct MI250X, ATI, CUDA, HEP, High Energy Physics - Lattice, HIP, Monte Carlo simulation, nVidia, nVidia H100, Package, Physics

December 1, 2024 by hgpu

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

Giulio Malenza, Valentina Cesare, Marco Edoardo Santimaria, Robert Birke, Alberto Vecchiato, Ugo Becciani, Marco Aldinucci

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Tags: AMD Radeon Instinct MI250X, Astrophysics, ATI, Computer science, CUDA, HIP, HPC, nVidia, nVidia A100, nVidia H100, nVidia V100, OpenMP, Package, Performance, performance portability, SYCL, Tesla T4

November 24, 2024 by hgpu

Accelerating Drug Discovery in AutoDock-GPU with Tensor Cores

Gabin Schieffer, Ivy Peng

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Tags: Chemistry, Computer science, CUDA, Macromolecule, molecular docking, nVidia, nVidia A100, nVidia V100, Physics, Tesla T4

October 20, 2024 by hgpu

Effects of OpenCL-Based Parallelization Methods on Explicit Numerical Methods to Solve the Heat Equation

Dániel Koics, Endre Kovács 2, Olivér Hornyák

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Tags: nVidia, OpenCL, Package, PDEs, Performance, Physics

October 13, 2024 by hgpu

RBMD: A molecular dynamics package enabling to simulate 10 million all-atom particles in a single graphics processing unit

Weihang Gao, Teng Zhao, Yongfa Guo, Jiuyang Liang, Huan Liu, Maoying Luo, Zedong Luo, Wei Qin, Yichao Wang, Qi Zhou, Shi Jin, Zhenli Xu

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Tags: Computational Physics, CUDA, Heterogeneous systems, Molecular dynamics, nVidia, nVidia GeForce RTX 4090, Package, Physics, Tesla A100, Tesla V100

July 28, 2024 by hgpu

GPU Parallelization of Astronomical Image Subtraction

Gustav Arneving, Hugo Wilhelmsson

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Tags: Astrophysics, nVidia, nVidia GeForce GTX 1050, OpenCL, OpenMP, Physics, Thesis

June 23, 2024 by hgpu

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

DeepCompile: A Compiler-Driven Approach to Optimizing Distributed Deep Learning Training

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

GigaAPI for GPU Parallelization

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

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high performance computing on graphics processing units: hgpu.org

Applications

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

Performant Automatic BLAS Offloading on Unified Memory Architecture with OpenMP First-Touch Style Data Movement

A comparison of HPC-based quantum computing simulators using Quantum Volume

Asynchronous-Many-Task Systems: Challenges and Opportunities – Scaling an AMR Astrophysics Code on Exascale machines using Kokkos and HPX

TorchQC – A framework for efficiently integrating machine and deep learning methods in quantum dynamics and control

CLUEstering: a high-performance density-based clustering library for scientific computing

Scaling SU(2) to 1000 GPUs using HiRep

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

Accelerating Drug Discovery in AutoDock-GPU with Tensor Cores

Effects of OpenCL-Based Parallelization Methods on Explicit Numerical Methods to Solve the Heat Equation

RBMD: A molecular dynamics package enabling to simulate 10 million all-atom particles in a single graphics processing unit

GPU Parallelization of Astronomical Image Subtraction

Recent source codes

PELSI: Power-Efficient Layer-Switched Inference

Ouroboros: Virtualized Queues for dynamic memory management

MSCCL++: A GPU-driven communication stack for scalable AI applications

Benchmark compute shader of Unity against InteropUnityCUDA

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

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