high performance computing on graphics processing units: hgpu.org

We evaluate using Julia as a single language and ecosystem paradigm powered by LLVM to develop workflow components for high-performance computing. We run a Gray-Scott, 2-variable diffusion-reaction application using a memory-bound, 7-point stencil kernel on Frontier, the US Department of Energy’s first exascale supercomputer. We evaluate the feasibility, performance, scaling, and trade-offs of (i) the […]

In this paper, we evaluate the portability of the SYCL programming model on some of the latest CPUs and GPUs from a wide range of vendors, utilizing the two main compilers: DPC++ and hipSYCL/OpenSYCL. Both compilers currently support GPUs from all three major vendors; we evaluate performance on the Intel(R) Data Center GPU Max 1100, […]

The heterogeneous computing paradigm has led to the need for portable and efficient programming solutions that can leverage the capabilities of various hardware devices, such as NVIDIA, Intel, and AMD GPUs. This study evaluates the portability and performance of the SYCL and CUDA languages for one fundamental bioinformatics application (Smith-Waterman protein database search) across different […]

As recently demonstrated, Deep Neural Networks (DNN), usually trained using single precision IEEE 754 floating point numbers (binary32), can also work using lower precision. Therefore, 16-bit and 8-bit compressed format have attracted considerable attention. In this paper, we focused on two families of formats that have already achieved interesting results in compressing binary32 numbers in […]

High performance computing is a complex field, with many homogeneous and heterogeneous hardware architectures, and numerous programming paradigms, libraries and compilers. OpenMP and netCDF are relatively widely used in Earth system research because they are comparatively easy to learn and yet can exploit the potential of a single compute node. However, Earth system scientists without […]

Over the past few years, there has been an increased interest in using FPGAs alongside CPUs and GPUs in high-performance computing systems and data centers. This trend has led to a push toward the use of high-level programming models and libraries, such as OpenCL, both to lower the barriers to the adoption of FPGAs by […]

We evaluate the use of the open-source Llama-2 model for generating well-known, high-performance computing kernels (e.g., AXPY, GEMV, GEMM) on different parallel programming models and languages (e.g., C++: OpenMP, OpenMP Offload, OpenACC, CUDA, HIP; Fortran: OpenMP, OpenMP Offload, OpenACC; Python: numpy, Numba, pyCUDA, cuPy; and Julia: Threads, CUDA.jl, AMDGPU.jl). We built upon our previous work […]

In recent history, GPUs became a key driver of compute performance in HPC. With the installation of the Frontier supercomputer, they became the enablers of the Exascale era; further largest-scale installations are in progress (Aurora, El Capitan, JUPITER). But the early-day dominance by NVIDIA and their CUDA programming model has changed: The current HPC GPU […]

We present patterns for Cuda/C++ to write save generic code which works both on the host and device side. Writing templated functions in Cuda/C++ both for the CPU and the GPU bears the problem that in general both __host__ and __device__ functions are instantiated, which leads to lots of compiler warnings or errors.

Adopting heterogeneous execution on GPUs and FPGAs in managed runtime systems, such as Java, is a challenging task due to the complexities of the underlying virtual machine. The majority of the current work has been focusing on compiler toolchains to solve the challenge of transparent just-in-time compilation of different code segments onto the accelerators. However, […]

With easier access to powerful compute resources, there is a growing trend in the field of AI for software development to develop larger and larger language models (LLMs) to address a variety of programming tasks. Even LLMs applied to tasks from the high-performance computing (HPC) domain are huge in size (e.g., billions of parameters) and […]

Sparse matrix-vector multiplication (SpMV) is central to many scientific, engineering, and other applications, including machine learning. Compressed Sparse Row (CSR) is a widely used sparse matrix storage format. SpMV using the CSR format on GPU computing platforms is widely studied, where the access behavior of GPU is often the performance bottleneck. The Ampere GPU architecture […]