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Efficient all-against-all protein similarity matrix computation using OpenCL

U. Köhler, A. Smirnov

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Tags: AMD Radeon HD 580, Bioinformatics, nVidia, OpenCL, Sequence alignment, Smith-Waterman algorithm

June 9, 2014 by hgpu

hpcbench: A set of benchmarking utilities for biomolecular simulation tools

Engineering Supercomputing Platforms for Biomolecular Applications

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

chemtrain: Training Molecular Dynamics Potentials in JAX

chemtrain-deploy: A parallel and scalable framework for machine learning potentials in million-atom MD simulations

microSYCL: SYCL micro-benchmarks repository

Exploring SYCL as a Portability Layer for High-Performance Computing on CPUs

XaaS containers

Acceleration as a Service (XaaS) Source Containers

CASS: Cuda-Amd aSSembly

CASS: Nvidia to AMD Transpilation with Data, Models, and Benchmark

Cluser of smartphones for edge computing application using TensorFlow

Low-cost edge computing using upcycled smartphones

SYCL Container

Exploring SYCL for batched kernels with memory allocations

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Can Large Language Models Predict Parallel Code Performance?

Can Large Language Models Predict Parallel Code Performance?

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