high performance computing on graphics processing units: hgpu.org

Programming

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Acceleration of a QM/MM-QMC simulation using GPU

Tomoharu Terashima, Ryo Maezono

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Tags: Computational Physics, CUDA, nVidia, nVidia GeForce GTX 275, Physics, QMC

November 23, 2010 by hgpu

GPU-based cone beam computed tomography

Peter B. Noel, Alan M. Walczak, Jinhui Xu, Jason J. Corso, Kenneth R. Hoffmann, Sebastian Schafer

Tags: Computed tomography, CT, CUDA, Medicine, nVidia, nVidia GeForce GTX 280

November 22, 2010 by hgpu

Tuned and wildly asynchronous stencil kernels for hybrid CPU/GPU systems

Sundaresan Venkatasubramanian, Richard W. Vuduc, None None

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Tags: Computer science, CUDA, nVidia, nVidia Quadro FX 570, Performance, Tesla C1060, Tesla C870

November 22, 2010 by hgpu

Parallel multi-objective evolutionary algorithms on graphics processing units

Man L. Wong

Tags: Artificial intelligence, Computer science, CUDA, nVidia, Optimization

November 22, 2010 by hgpu

GPU computing with Kaczmarz’s and other iterative algorithms for linear systems

Joseph M. Elble, Nikolaos V. Sahinidis, Panagiotis Vouzis

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Tags: CUDA, Differential equations, Fluid dynamics, Linear Algebra, nVidia, Tesla C870

November 22, 2010 by hgpu

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

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Tags: Biology, Computer science, CUDA, Error recovery, nVidia, Package

November 22, 2010 by hgpu

Interventional 4-D Motion Estimation and Reconstruction of Cardiac Vasculature without Motion Periodicity Assumption

C. Rohkohl, G. Lauritsch, L. Biller, M. Prummer, J. Boese, J. Hornegger

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Tags: CT, CUDA, Image reconstruction, Medicine, Motion compensation, nVidia, nVidia Quadro FX 5800

November 22, 2010 by hgpu

Fast reduction of undersampling artifacts in radial MR angiography with 3D total variation on graphics hardware

Florian Knoll, Markus Unger, Clemens Diwoky, Christian Clason, Thomas Pock, Rudolf Stollberger

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Tags: Computer vision, CUDA, Medicine, MRI, nVidia, nVidia GeForce GTX 280

November 22, 2010 by hgpu

Real-time ambient occlusion and halos with summed area tables

Jose Diaz, Pere-Pau Vazquez, Isabel Navazo, Florent Duguet

Tags: 3D Graphics and Realism, Computer science, CUDA, nVidia, Rendering

November 22, 2010 by hgpu

Reionization Simulations Powered by Graphics Processing Units. I. On the Structure of the Ultraviolet Radiation Field

Dominique Aubert, Romain Teyssier

Tags: Astrophysics, Cosmology, CUDA, nVidia

November 22, 2010 by hgpu

Dense photometric stereo reconstruction on many core GPUs

Andreas Varnavas, Vasileios Argyriou, Jeffrey Ng, Anil A. Bharath

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 295

November 22, 2010 by hgpu

Parallel Position Weight Matrices Algorithms

Mathieu Giraud, Jean-Stephane Varre

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Tags: Biology, Computer science, CUDA, nVidia, nVidia GeForce 8800, nVidia GeForce GTX 280, Package

November 22, 2010 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

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high performance computing on graphics processing units: hgpu.org

Programming

Acceleration of a QM/MM-QMC simulation using GPU

GPU-based cone beam computed tomography

Tuned and wildly asynchronous stencil kernels for hybrid CPU/GPU systems

Parallel multi-objective evolutionary algorithms on graphics processing units

GPU computing with Kaczmarz’s and other iterative algorithms for linear systems

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Interventional 4-D Motion Estimation and Reconstruction of Cardiac Vasculature without Motion Periodicity Assumption

Fast reduction of undersampling artifacts in radial MR angiography with 3D total variation on graphics hardware

Real-time ambient occlusion and halos with summed area tables

Reionization Simulations Powered by Graphics Processing Units. I. On the Structure of the Ultraviolet Radiation Field

Dense photometric stereo reconstruction on many core GPUs

Parallel Position Weight Matrices Algorithms

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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