high performance computing on graphics processing units: hgpu.org

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High Performance Portable Tsunami Simulations on Many-core CPU, GPU, and FPGA

Fumiya Kono

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Tags: AMD FirePro W8100, AMD FirePro W9100, AMD Radeon R9 280X, ATI, CUDA, Earth and Space Sciences, FPGA, Intel Xeon Phi, Numerical simulation, nVidia, OpenCL, Tesla K20, Thesis

December 9, 2018 by hgpu

ASW: Accelerating Smith-Waterman Algorithm on Coupled CPU-GPU Architecture

Huihui Zou, Shanjiang Tang, Ce Yu, Hao Fu, Yusen Li, Wenjie Tang

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Tags: Algorithms, APU, Bioinformatics, Biology, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 750, OpenCL, Sequence alignment, Smith-Waterman algorithm

December 9, 2018 by hgpu

Mix-and-Match: A Model-driven Runtime Optimisation Strategy for BFS on GPUs

Merijn Verstraaten, Ana Lucia Varbanescu, Cees de Laat

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Tags: Breadth-First Search, Computer science, CUDA, nVidia, nVidia GeForce GTX Titan X, OpenCL, Package

December 2, 2018 by hgpu

Parallel source code transformation techniques using design patterns

David del Rio Astorga

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Tags: Algorithms, Auto-Tuning, Code generation, Computer science, CUDA, nVidia, nVidia GeForce GTX 680, Tesla K40, Thesis

December 2, 2018 by hgpu

Performance Portability Challenges for Fortran Applications

Abigail Hsu, David Neill Asanza, Joseph A. Schoonover, Zach Jibben, Neil N. Carlson, Robert Robey

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Tags: Computer science, CUDA, Finite difference, Fortran, nVidia, OpenMP, Package, performance portability, Tesla P100, Tesla V100

December 2, 2018 by hgpu

SuperNeurons: FFT-based Gradient Sparsification in the Distributed Training of Deep Neural Networks

Linnan Wang, Wei Wu, Yiyang Zhao, Junyu Zhang, Hang Liu, George Bosilca, Jack Dongarra, Maurice Herlihy, Rodrigo Fonseca

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Tags: Compression, Computer science, CUDA, Deep learning, FFT, GPU cluster, Neural networks, nVidia, Package, Tesla P100

November 25, 2018 by hgpu

Modeling Deep Learning Accelerator Enabled GPUs

Md Aamir Raihan, Negar Goli, Tor Aamodt

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Tags: Computer science, CUDA, Deep learning, Hardware Architecture, Machine learning, nVidia, Tesla V100

November 25, 2018 by hgpu

Dense and sparse parallel linear algebra algorithms on graphics processing units

Alejandro Lamas Davina

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Tags: Algorithms, Computer science, CUDA, Linear Algebra, MPI, nVidia, Sparse, Tesla K20, Tesla M2090, Thesis

November 25, 2018 by hgpu

Spatter: A Benchmark Suite for Evaluating Sparse Access Patterns

Patrick Lavin, Jason Riedy, Rich Vuduc, Jeffrey Young

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Tags: Benchmarking, Computer science, CUDA, FPGA, Intel Xeon Phi, nVidia, nVidia GeForce GTX Titan XP, OpenCL, Package, Performance, Tesla P100

November 18, 2018 by hgpu

Accelerating Low-End Edge Computing with Cross-Kernel Functionality Abstraction

Chao Wu, Yaoxue Zhang, Yuezhi Zhou, Qiushi Li

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 1080 Ti, OpenCL, Performance

November 18, 2018 by hgpu

FusionStitching: Deep Fusion and Code Generation for Tensorflow Computations on GPUs

Guoping Long, Jun Yang, Kai Zhu, Wei Lin

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Tags: Code generation, Computer science, CUDA, Deep learning, Machine learning, nVidia, TensorFlow

November 18, 2018 by hgpu

StePS: A Multi-GPU Cosmological N-body Code for Compactified Simulations

Gabor Racz, Istvan Szapudi, Laszlo Dobos, Istvan Csabai, Alexander S. Szalay

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Tags: Astrophysics, Cosmology, CUDA, MPI, N-body simulation, nVidia, OpenMP, Package, Tesla K80

November 18, 2018 by hgpu

CLort: High Throughput and Low Energy Network Intrusion Detection on IoT Devices with Embedded GPUs

SuperNeurons: FFT-based Gradient Sparsification in the Distributed Training of Deep Neural Networks

SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences

Spatter: Benchmark for measuring the performance of sparse and irregular memory access

Spatter: A Benchmark Suite for Evaluating Sparse Access Patterns

StePS: Stereographically Projected Cosmological Simulations

StePS: A Multi-GPU Cosmological N-body Code for Compactified Simulations

AMGCL:C++ library for solving large sparse linear systems with algebraic multigrid method

AMGCL: an Efficient, Flexible, and Extensible Algebraic Multigrid Implementation

PAstudy

Double-precision FPUs in High-Performance Computing: an Embarrassment of Riches?

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high performance computing on graphics processing units: hgpu.org

High Performance Portable Tsunami Simulations on Many-core CPU, GPU, and FPGA

ASW: Accelerating Smith-Waterman Algorithm on Coupled CPU-GPU Architecture

Mix-and-Match: A Model-driven Runtime Optimisation Strategy for BFS on GPUs

Parallel source code transformation techniques using design patterns

Performance Portability Challenges for Fortran Applications

SuperNeurons: FFT-based Gradient Sparsification in the Distributed Training of Deep Neural Networks

Modeling Deep Learning Accelerator Enabled GPUs

Dense and sparse parallel linear algebra algorithms on graphics processing units

Spatter: A Benchmark Suite for Evaluating Sparse Access Patterns

Accelerating Low-End Edge Computing with Cross-Kernel Functionality Abstraction

FusionStitching: Deep Fusion and Code Generation for Tensorflow Computations on GPUs

StePS: A Multi-GPU Cosmological N-body Code for Compactified Simulations

Recent source codes

schnaps: a finite element solver

GPU-benchmarks

Truchas: 3D Multiphysics Simulation of Metal Casting and Processing

CLort: High Throughput and Low Energy Network Intrusion Detection on IoT Devices with Embedded GPUs

SuperNeurons: FFT-based Gradient Sparsification in the Distributed Training of Deep Neural Networks

SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences

Spatter: Benchmark for measuring the performance of sparse and irregular memory access

StePS: Stereographically Projected Cosmological Simulations

AMGCL:C++ library for solving large sparse linear systems with algebraic multigrid method

PAstudy

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International Conference on Frontiers of Neural Networks (ICFNN), 2019

International Conference on Frontiers of Artificial Intelligence and Machine Learning (FAIML), 2019

3rd World Conference on Clinical Research and Biomarkers, 2019

3rd International Conference on Vision, Image and Signal Processing (ICVISP), 2019

3rd International Symposium on Intelligent Unmanned Systems and Artificial Intelligence (SIUSAI), 2019