Fast reduction of undersampling artifacts in radial MR angiography with 3D total variation on graphics hardware

Florian Knoll, Markus Unger, Clemens Diwoky, Christian Clason, Thomas Pock, Rudolf Stollberger
Institute of Medical Engineering, Graz University of Technology, Kronesgasse 5/II, A-8010 Graz, Austria
Magnetic Resonance Materials in Physics, Biology and Medicine (30 March 2010)


   title={Fast reduction of undersampling artifacts in radial MR angiography with 3D total variation on graphics hardware},

   author={Knoll, F. and Unger, M. and Diwoky, C. and Clason, C. and Pock, T. and Stollberger, R.},

   journal={Magnetic Resonance Materials in Physics, Biology and Medicine},








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OBJECTIVE: Subsampling of radially encoded MRI acquisitions in combination with sparsity promoting methods opened a door to significantly increased imaging speed, which is crucial for many important clinical applications. In particular, it has been shown recently that total variation (TV) regularization efficiently reduces undersampling artifacts. The drawback of the method is the long reconstruction time which makes it impossible to use in daily clinical practice, especially if the TV optimization problem has to be solved repeatedly to select a proper regularization parameter. MATERIALS and METHODS: The goal of this work was to show that for the case of MR Angiography, TV filtering can be performed as a post-processing step, in contrast to the common approach of integrating TV penalties in the image reconstruction process. With this approach, it is possible to use TV algorithms with data fidelity terms in image space, which can be implemented very efficiently on graphic processing units (GPUs). The combination of a special radial sampling trajectory and a full 3D formulation of the TV minimization problem is crucial for the effectiveness of the artifact elimination process. RESULTS and CONCLUSION: The computation times of GPU-TV show that interactive elimination of undersampling artifacts is possible even for large volume data sets, in particular allowing the interactive determination of the regularization parameter. Results from phantom measurements and in vivo angiography data sets show that 3D TV, together with the proposed sampling trajectory, leads to pronounced improvements in image quality. However, while artifact removal was very efficient for angiography data sets in this work, it cannot be expected that the proposed method of TV post-processing will work for arbitrary types of scans.
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