28876

cuSZ-I: High-Fidelity Error-Bounded Lossy Compression for Scientific Data on GPUs

Jinyang Liu, Jiannan Tian, Shixun Wu, Sheng Di, Boyuan Zhang, Yafan Huang, Kai Zhao, Guanpeng Li, Dingwen Tao, Zizhong Chen, Franck Cappello
University of California, Riverside, Riverside, CA, USA
arXiv:2312.05492 [cs.DC], (9 Dec 2023)

@misc{liu2023cuszi,

   title={cuSZ-I: High-Fidelity Error-Bounded Lossy Compression for Scientific Data on GPUs},

   author={Jinyang Liu and Jiannan Tian and Shixun Wu and Sheng Di and Boyuan Zhang and Yafan Huang and Kai Zhao and Guanpeng Li and Dingwen Tao and Zizhong Chen and Franck Cappello},

   year={2023},

   eprint={2312.05492},

   archivePrefix={arXiv},

   primaryClass={cs.DC}

}

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Error-bounded lossy compression is a critical technique for significantly reducing scientific data volumes. Compared to CPU-based scientific compressors, GPU-accelerated compressors exhibit substantially higher throughputs, which can thus better adapt to GPU-based scientific simulation applications. However, a critical limitation still lies in all existing GPU-accelerated error-bounded lossy compressors: they suffer from low compression ratios, which strictly restricts their scope of usage. To address this limitation, in this paper, we propose a new design of GPU-accelerated scientific error-bounded lossy compressor, namely cuSZ-I, which has achieved the following contributions: (1) A brand new GPU-customized interpolation-based data pre-diction method is raised in cuSZ-I for extensively improving the compression ratio and the decompression data quality. (2) The Huffman encoding module in cuSZ-I has been improved for both efficiency and stability. (3) cuSZ-I is the first work to integrate the highly effective NVIDIA bitcomp lossless compression module to maximally boost the compression ratio for GPU-accelerated lossy compressors with nearly negligible speed degradation. In experimental evaluations, with the same magnitude of compression throughput as existing GPU-accelerated compressors, in terms of compression ratio and quality, cuSZ-I outperforms other state-of-the-art GPU-based scientific lossy compressors to a significant extent. It gains compression ratio improvements by up to 500% under the same error bound or PSNR. In several real-world use cases, cuSZ-I also achieves the optimized performance, having the minimized time cost for distributed lossy data transmission tasks and the highest decompression data visualization quality.
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