high performance computing on graphics processing units: hgpu.org

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Efficient Probabilistic and Geometric Anatomical Mapping Using Particle Mesh Approximation on GPUs

Linh Ha, Marcel Prastawa, Guido Gerig, John H. Gilmore, Claudio T. Silva, Sarang Joshi1

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Tags: Algorithms, CUDA, Image processing, Image registration, Medicine, MRI, nVidia, nVidia GeForce GTX 260

December 21, 2011 by hgpu

A simulation suite for lattice Boltzmann based real time CFD applications exploiting multi-level parallelism on modern multi-and many-core architectures

Markus Geveler, Dirk Ribbrock, Sven Mallach, Dominik Goddeke

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Tags: CUDA, Fluid dynamics, Heterogeneous systems, Lattice Boltzmann model, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 285

December 21, 2011 by hgpu

Warp-Level Parallelism: Enabling Multiple Replications In Parallel on GPU

Jonathan Passerat-Palmbach, Jonathan Caux, Pridi Siregar, Claude Mazel, D.R.C.Hill

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Tags: Benchmarking, Computer science, CUDA, nVidia, Stochastic simulation, Tesla C2050, Warp level parallelism

December 21, 2011 by hgpu

A Normalized Particle Swarm Optimization Algorithm to Price Complex Chooser Option and Accelerating its Performance with GPU

Bhanu Pratap Sharma

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Tags: Algorithms, Computational finance, CUDA, Finance, nVidia, nVidia GeForce GTX 450, nVidia GeForce GTX 550 Ti, Thesis

December 21, 2011 by hgpu

Parallel Inference on Structured Data with CRFs on GPUs

Nico Piatkowski, Katharina Morik

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Tags: Algorithms, Computer science, CUDA, Databases, Graph theory, nVidia, Package, Tesla C2050

December 21, 2011 by hgpu

Generating SU(Nc) pure gauge lattice QCD configurations on GPUs with CUDA and OpenMP

Nuno Cardoso, Pedro Bicudo

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, Matrix multiplication, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 580, Package, Physics, QCD

December 21, 2011 by hgpu

Implementation of a Parallel Tree Method on a GPU

Naohito Nakasato

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Tags: Astrophysics, ATI, ATI IL, ATI Radeon HD 5870, Computational Complexity, Computer science, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, KD-tree, OpenCL, Optimization, Performance

December 21, 2011 by hgpu

Performance and Quality of Random Number Generators

V. du Preez, M.G.B. Johnson, A. Leist, K.A. Hawick

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Tags: Algorithms, Computer science, CUDA, Monte Carlo simulation, Numerical simulation, nVidia, nVidia GeForce GTX 580, Pseudo-random number generators, Review

December 20, 2011 by hgpu

GPU Accelerated PK-means Algorithm for Gene Clustering

Wuchao Situ, Yau-King Lam, Yi Xiao, P.W.M. Tsang, Chi-Sing Leung

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Tags: Algorithms, Biology, Clustering, CUDA, Genetics, nVidia, nVidia GeForce GTX 260

December 20, 2011 by hgpu

A Framework for Genetic Algorithms in Parallel Environments

Tomoyuki Hiroyasu, Ryosuke Yamanaka, Masato Yoshimi, Mitsunori Miki

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Tags: Algorithms, Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce GTX 250

December 20, 2011 by hgpu

Parallel Contour-Buildup Algorithm for the Molecular Surface

Michael Krone, Sebastian Grottel, Thomas Ertl

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Tags: Algorithms, Chemistry, CUDA, Molecular dynamics, Molecular surface, nVidia, nVidia GeForce GTX 580, Optimization, Pharmaceuticals, Visualization

December 20, 2011 by hgpu

Analysis of GPGPU Platforms Efficiency in General-Purpose Computations

Pavel Kartashev, Vladislavs Nazaruk

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Tags: ATI, ATI Radeon HD 5750, Benchmarking, Computer science, nVidia, nVidia GeForce GT 240, OpenCL, Performance

December 20, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

Efficient Probabilistic and Geometric Anatomical Mapping Using Particle Mesh Approximation on GPUs

A simulation suite for lattice Boltzmann based real time CFD applications exploiting multi-level parallelism on modern multi-and many-core architectures

Warp-Level Parallelism: Enabling Multiple Replications In Parallel on GPU

A Normalized Particle Swarm Optimization Algorithm to Price Complex Chooser Option and Accelerating its Performance with GPU

Parallel Inference on Structured Data with CRFs on GPUs

Generating SU(Nc) pure gauge lattice QCD configurations on GPUs with CUDA and OpenMP

Implementation of a Parallel Tree Method on a GPU

Performance and Quality of Random Number Generators

GPU Accelerated PK-means Algorithm for Gene Clustering

A Framework for Genetic Algorithms in Parallel Environments

Parallel Contour-Buildup Algorithm for the Molecular Surface

Analysis of GPGPU Platforms Efficiency in General-Purpose Computations

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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