high performance computing on graphics processing units: hgpu.org

Ensemble empirical-mode decomposition (EEMD) is a novel adaptive time-frequency analysis method, which is particularly suitable for extracting useful information from noisy nonlinear or nonstationary data. Unfortunately, since the EEMD is highly compute-intensive, the method does not apply in real-time applications on top of commercial-off-the-shelf computers. Aiming at this problem, a parallelized EEMD method has been developed using general-purpose computing on the graphics processing unit (GPGPU), namely, G-EEMD. A spectral entropy facilitated by G-EEMD was, therefore, proposed to analyze the EEG data for estimating the depth of anesthesia (DoA) in a real-time manner. In terms of EEG data analysis, G-EEMD has dramatically improved the run-time performance by more than 140 times compared to the original serial EEMD implementation. G-EEMD also performs far better than another parallelized implementation of EEMD bases on conventional CPU-based distributed computing technology despite the latter utilizes 16 high-end computing nodes for the same computing task. Furthermore, the results obtained from a pharmacokinetics/pharmacodynamic (PK/PD) model analysis indicate that the EEMD method is slightly more effective than its precedent alternative method (EMD) in estimating DoA, the coefficient of determination R^2 by EEMD is significantly higher than that by EMD (p < 0.05, paired Mest) and the prediction probability Pk by EEMD is also slighter higher than that by EMD (p < 0.2, paired t-test).