high performance computing on graphics processing units: hgpu.org

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Measurements of performance of hardware and general purpose classical molecular dynamics simulation software

Jose O. Sotero-Esteva

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Tags: CUDA, Molecular dynamics, nVidia, Physics, Tesla C2075

October 5, 2013 by hgpu

Exploring Programming Multi-GPUs using OpenMP & OpenACC-based Hybrid Model

Rengan Xu, Sunita Chandrasekaran, Barbara Chapman

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Tags: Computer science, Heterogeneous systems, nVidia, OpenACC, OpenMP, Tesla C2075

September 30, 2013 by hgpu

gEMfitter: A Highly Parallel FFT-Based 3D Density Fitting Tool With GPU Texture Memory Acceleration

Thai V. Hoang, Xavier Cavin, David W. Ritchie

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Tags: Biology, Cryo-EM, CUDA, Electron microscopy, FFT, Macromolecule, Microscopy, nVidia, Tesla C2075

September 28, 2013 by hgpu

Performance of OpenCL

Tadeusz Puzniakowski

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Tags: Algorithms, Computer science, Linear Algebra, nVidia, nVidia GeForce 8500 GT, nVidia Quadro 600, OpenCL, Tesla C2075

September 23, 2013 by hgpu

A GPU Implementation of Parallel Constraint-based Local Search

Alejandro Arbelaez, Philippe Codognet

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Tags: Algorithms, Computer science, CUDA, nVidia, Search, Tesla C2075

September 21, 2013 by hgpu

Exponential Integrators on Graphics Processing Units

Lukas Einkemmer, Alexander Ostermann

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Tags: Computer science, CUDA, Differential equations, Numerical Analysis, nVidia, Tesla C1060, Tesla C2075

September 20, 2013 by hgpu

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Christopher D. Cooper, Jaydeep P. Bardhan, L. A. Barba

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Tags: Biomolecules, Boltzmann equation, Computational Physics, CUDA, Electrostatics, Intel Phi, nVidia, Package, Physics, Poisson Boltzmann, Python, Tesla C2075

September 17, 2013 by hgpu

Recent progress and challenges in exploiting graphics processors in computational fluid dynamics

Kyle E Niemeyer, Chih-Jen Sung

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Tags: Algorithms, Computational Physics, CUDA, Fluid dynamics, Lattice Boltzmann model, Navier-Stokes equations, NSEs, nVidia, OpenACC, Package, Review, Tesla C2075

September 13, 2013 by hgpu

Accelerating moderately stiff chemical kinetics in reactive-flow simulations using GPUs

Kyle E Niemeyer, Chih-Jen Sung

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Tags: Algorithms, Computational Physics, CUDA, nVidia, Physics, Tesla C2075

September 13, 2013 by hgpu

A Mixed Hierarchical Algorithm for Nearest Neighbor Search

Carlo del Mundo, Mariam Umar

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Tags: Algorithms, Computer science, CUDA, Nearest neighbour, nVidia, Tesla C2075

September 11, 2013 by hgpu

GPU-based simulation of brain neuron models

H. A. Du Nguyen

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Tags: CUDA, Neural networks, Neuroscience, nVidia, nVidia GeForce GT 640, Review, Tesla C2075, Thesis

September 7, 2013 by hgpu

Simulating Dam-Break Flooding with Floating Objects through Intricate City Layouts Using GPU-based SPH Method

Jiansong Wu, Hui Zhang, Robert A. Dalrymple

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Tags: CUDA, Earth and Space Sciences, Fluid dynamics, Navier-Stokes equations, NSEs, nVidia, Package, Tesla C2075

August 20, 2013 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Measurements of performance of hardware and general purpose classical molecular dynamics simulation software

Exploring Programming Multi-GPUs using OpenMP & OpenACC-based Hybrid Model

gEMfitter: A Highly Parallel FFT-Based 3D Density Fitting Tool With GPU Texture Memory Acceleration

Performance of OpenCL

A GPU Implementation of Parallel Constraint-based Local Search

Exponential Integrators on Graphics Processing Units

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Recent progress and challenges in exploiting graphics processors in computational fluid dynamics

Accelerating moderately stiff chemical kinetics in reactive-flow simulations using GPUs

A Mixed Hierarchical Algorithm for Nearest Neighbor Search

GPU-based simulation of brain neuron models

Simulating Dam-Break Flooding with Floating Objects through Intricate City Layouts Using GPU-based SPH Method

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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