high performance computing on graphics processing units: hgpu.org

Using high-level synthesis (HLS) tools for field-programmable gate array (FPGA) design is becoming an increasingly popular choice because HLS tools can generate a high-quality design in a short development time. However, current HLS tools still cannot adequately support users in understanding and fixing the performance issues of the current design. That is, current HLS tools […]

We introduce SneakySnake, a highly parallel and highly accurate pre-alignment filter that remarkably reduces the need for the computationally costly sequence alignment step. The key idea of SneakySnake is to provide fast and highly accurate filtering by reducing the ASM problem to the single net routing (SNR) problem in VLSI chip layout. In the SNR […]

Autotuning of performance-relevant source-code parameters allows to automatically tune applications without hard coding optimizations and thus helps with keeping the performance portable. In this paper, we introduce a benchmark set of ten autotunable kernels for important computational problems implemented in OpenCL or CUDA. Using our Kernel Tuning Toolkit, we show that with autotuning most of […]

The performance of mobile AI accelerators has been evolving rapidly in the past two years, nearly doubling with each new generation of SoCs. The current 4th generation of mobile NPUs is already approaching the results of CUDA-compatible Nvidia graphics cards presented not long ago, which together with the increased capabilities of mobile deep learning frameworks […]

Model parameter synchronization across GPUs introduces high overheads for data-parallel training at scale. Existing parameter synchronization protocols cannot effectively leverage available network resources in the face of ever increasing hardware heterogeneity. To address this, we propose Blink, a collective communication library that dynamically generates optimal communication primitives by packing spanning trees. We propose techniques to […]

Most, if not all the modern scientific simulation packages utilize matrix algebra operations. Among the operation of the linear algebra, one of the most important kernels is the multiplication of matrices, dense and sparse. Examples of application of such a kernel are in electronic structure calculations, machine learning, data mining, graph processing, and digital signal […]

Modern deep learning models have been exploited in various domains, including computer vision (CV), natural language processing (NLP), search and recommendation. In practical AI clusters, workloads training these models are run using software frameworks such as TensorFlow, Caffe, PyTorch and CNTK. One critical issue for efficiently operating practical AI clouds, is to characterize the computing […]

Supported by their high power efficiency and recent advancements in High Level Synthesis (HLS), FPGAs are quickly finding their way into HPC and cloud systems. Large amounts of work have been done so far on loop and area optimizations for different applications on FPGAs using HLS. However, a comprehensive analysis of the behavior and efficiency […]

A fundamental recurring task in many machine learning applications is the search for the Nearest Neighbor in high dimensional metric spaces. Towards answering queries in large scale problems, state-of-the-art methods employ Approximate Nearest Neighbors (ANN) search, a search that returns the nearest neighbor with high probability, as well as techniques that compress the dataset. Product-Quantization […]

The efficiency of concurrent data structures is crucial to the performance of multithreaded programs in shared-memory systems. The arbitrary execution of concurrent threads, however, can result in an incorrect behavior of these data structures. Graphics Processing Units (GPUs) have appeared as a powerful platform for high-performance computing. As regular data-parallel computations are straightforward to implement […]

Convolutional Neural Networks (CNN) are becoming a common presence in many applications and services, due to their superior recognition accuracy. They are increasingly being used on mobile devices, many times just by porting large models designed for server space, although several model compression techniques have been considered. One model compression technique intended to reduce computations […]

High-level synthesis (HLS) tools have brought FPGA development into the mainstream, by allowing programmers to design architectures using familiar languages such as C, C++, and OpenCL. While the move to these languages has brought significant benefits, many aspects of traditional software engineering are still unsupported, or not exploited by developers in practice. Furthermore, designing reconfigurable […]