high performance computing on graphics processing units: hgpu.org

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GPU-enabled FREALIGN: Accelerating single particle 3D reconstruction and refinement in Fourier space on graphic processors

Xueming Li, Nikolaus Grigorieff, Yifan Cheng

Tags: Biology, CUDA, Electron microscopy, Image reconstruction, nVidia, Package

November 18, 2010 by hgpu

Fast free-form deformation using graphics processing units

Marc Modat, Gerard R. Ridgway, Zeike A. Taylor, Manja Lehmann, Josephine Barnes, David J. Hawkes, Nick C. Fox, Sebastien Ourselin

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Tags: Biology, CUDA, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTX, Package

November 17, 2010 by hgpu

permGPU: Using graphics processing units in RNA microarray association studies

Ivo Shterev, Sin H. Jung, Stephen George, Kouros Owzar

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Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 280, Package, RNA

November 17, 2010 by hgpu

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

Stanimire Tomov, Rajib Nath, Jack Dongarra

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Tags: BLAS, Computer science, CUBLAS, CUDA, Linear Algebra, nVidia, nVidia GeForce GTX 280, Package

November 17, 2010 by hgpu

Graphic processors to speed-up simulations for the design of high performance solar receptors

Sylvain Collange, Marc Daumas, David Defour

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Tags: ATI, ATI Radeon RX 1800 XL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Optics, Package, Physics

November 13, 2010 by hgpu

A multiphysics and multiscale software environment for modeling astrophysical systems

Simon Portegies Zwart, Steve McMillan, Stefan Harfst, Derek Groen, Michiko Fujii, Breanndan O Nuallain, Evert Glebbeek, Douglas Heggie, James Lombardi, Piet Hut, Vangelis Angelou, Sambaran Banerjee, Houria Belkus, Tassos Fragos, John Fregeau, Evghenii Gaburov, Rob Izzard, Mario Juric, Stephen Justham, Andrea Sottoriva, Peter Teuben, Joris van Bever, Ofer Yaron, Marcel Zemp

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Tags: Astrophysics, N-body simulation, nVidia, Package

November 13, 2010 by hgpu

CUDAEASY – a GPU Accelerated Cosmological Lattice Program

Jani Sainio

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Tags: Astrophysics, Computational Physics, Cosmology and Extragalactic Astrophysics, CUDA, High Energy Physics - Phenomenology, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 260, Package

November 13, 2010 by hgpu

Air pollution modelling using a graphics processing unit with CUDA

Ferenc Molnar Jr., Tamas Szakaly, Robert Meszaros, Istvan Lagzi

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Tags: Computational Physics, CUDA, Earth and Space Sciences, Medical Physics, nVidia, nVidia GeForce 8800 GTS, nVidia GeForce 8800 GTX, Package, Physics

November 13, 2010 by hgpu

Real-time digital holographic microscopy observable in multi-view and multi-resolution

Tomoyoshi Shimobaba, Nobuyuki Masuda, Yasuyuki Ichihashi, Tomoyoshi Ito

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Tags: Biological Physics, Computational Physics, Computer holography, CUDA, nVidia, nVidia GeForce GTX 295, Optics, Package, Physics

November 12, 2010 by hgpu

Exact Sparse Matrix-Vector Multiplication on GPU’s and Multicore Architectures

Brice Boyer, Jean-Guillaume Dumas, Pascal Giorgi

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Tags: Computer science, CUDA, Mathematical Software, nVidia, nVidia GeForce GTX 280, OpenMP, Package, Sparse matrix, Symbolic Computation

November 11, 2010 by hgpu

MYRIAD: A new N-body code for simulations of Star Clusters

Simos Konstantinidis, Kostas D. Kokkotas

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Tags: Astrophysics, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, Package, Tesla C1060

November 11, 2010 by hgpu

QYMSYM: A GPU-Accelerated Hybrid Symplectic Integrator That Permits Close Encounters

Alexander Moore, Alice C. Quillen

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Tags: Astrophysics, Celestial mechanics, CUDA, Earth and Planetary Astrophysics, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package

November 10, 2010 by hgpu

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

Kokkidio: Fast, expressive, portable code, based on Kokkos and Eigen

LLaMA-Inference-Bench

LLM-Inference-Bench: Inference Benchmarking of Large Language Models on AI Accelerators

MATAR

On a Simplified Approach to Achieve Parallel Performance and Portability Across CPU and GPU Architectures

Over-synchronization in GPU Programs

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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