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A framework for simulating and estimating the state and functional topology of complex dynamic geometric networks

Marius Buibas, Gabriel A. Silva

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Tags: Biological Physics, Condensed matter, CUDA, Disordered Systems and Neural Networks, Mathematical Physics, Neurons and Cognition, nVidia, Package, Physics, Tesla C1060

November 9, 2010 by hgpu

Efficient pseudo-random number generators for biomolecular simulations on graphics processors

A. Zhmurov, K. Rybnikov, Y. Kholodov, V. Barsegov

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Tags: Biological Physics, Chemical Physics, CUDA, nVidia, nVidia GeForce GTX 295, Physics, Pseudo-random number generators

November 9, 2010 by hgpu

Fast and accurate protein substructure searching with simulated annealing and GPUs

Alex D. Stivala, Peter J. Stuckey, Anthony I. Wirth

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Tags: Bioinformatics, Biological Physics, Biology, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 285, Package, Tesla C1060

November 2, 2010 by hgpu

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

M. J. Harvey, G. Giupponi, G. De Fabritiis

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Tags: Biological Physics, Chemistry, Computational Physics, CUDA, GPU cluster, Molecular dynamics, nVidia, nVidia GeForce GTX 280, Package, Physics, Tesla C1060

October 27, 2010 by hgpu

ATTUNE: Agentic Throughput Tuning for LLM Training

HPCAgent-Bench: A Framework for Sound Benchmarking of Code-Optimizing Agents, Harnesses, and Skills

Brian2 Atlas

A Unified Intermediate Representation and Execution Architecture for Heterogeneous and Distributed Neural Simulation

AgentGarten: Code Worlds for Evolving Agents

KernelLens: Automated Triton-to-C++ Compiler for Enterprise Inference Runtimes

KernelLens: Deploying Triton Kernels to C++ Inference Engines

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

Introduction to Computer Vision

ACT: Accelerator Compiler Toolkit

Automatically Generating ML Compiler Backends from Tensor Accelerator ISA Descriptions

pytest-gpu-proof: A Simple Pytest Extension for Local GPU Code Testing

pytest-gpu-proof: Enabling Cloud-CPU Continuous Integration for GPU Code with Local GPU Attestation

Accelerating the Mitigation of LLM Inference Nondeterminism Across GPU Architectures

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high performance computing on graphics processing units: hgpu.org

A framework for simulating and estimating the state and functional topology of complex dynamic geometric networks

Efficient pseudo-random number generators for biomolecular simulations on graphics processors

Fast and accurate protein substructure searching with simulated annealing and GPUs

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

Recent source codes

ATTUNE: Agentic Throughput Tuning for LLM Training

HPCAgent-Bench: A Framework for Sound Benchmarking of Code-Optimizing Agents, Harnesses, and Skills

Brian2 Atlas

AgentGarten: Code Worlds for Evolving Agents

KernelLens: Automated Triton-to-C++ Compiler for Enterprise Inference Runtimes

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

Introduction to Computer Vision

ACT: Accelerator Compiler Toolkit

pytest-gpu-proof: A Simple Pytest Extension for Local GPU Code Testing

Accelerating the Mitigation of LLM Inference Nondeterminism Across GPU Architectures

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