high performance computing on graphics processing units: hgpu.org

hgpu.org » Soft Condensed Matter

Polymer Field-Theory Simulations on Graphics Processing Units

Kris T. Delaney, Glenn H. Fredrickson

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Tags: Computational Physics, CUDA, Field equations, MPI, nVidia, Physics, Polymer Systems, Soft Condensed Matter, Statistical Mechanics, Tesla C2050

April 25, 2012 by hgpu

Thermal and Athermal Swarms of Self-Propelled Particles

Nguyen Nguyen, Eric Jankowski, Sharon C. Glotzer

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Tags: Computational Physics, Condensed matter, CUDA, nVidia, Package, Physics, Probability, Soft Condensed Matter, Tesla S1070

January 4, 2012 by hgpu

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Takashi Uneyama

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Tags: Condensed matter, CUDA, nVidia, Physics, Soft Condensed Matter, Tesla C1060

June 16, 2011 by hgpu

Anomalous Structure and Scaling of Ring Polymer Brushes

Daniel Reith, Andrey Milchev, Peter Virnau, Kurt Binder

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Tags: Condensed matter, Materials Science, nVidia, nVidia GeForce GTX 480, Physics, Soft Condensed Matter, Statistical Mechanics

April 29, 2011 by hgpu

Highly accelerated simulations of glassy dynamics using GPUs: caveats on limited floating-point precision

Peter H. Colberg, Felix Hofling

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Tags: Computational Physics, CUDA, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 280, Package, Physics, Soft Condensed Matter

January 18, 2011 by hgpu

Langevin dynamics simulations of biomolecules on graphics processors

A. Zhmurov, R. I. Dima, Y. Kholodov, V. Barsegov

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Tags: Biological Physics, Biomolecules, Condensed matter, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 295, Physics, Soft Condensed Matter

November 12, 2010 by hgpu

CUDA simulations of active dumbbell suspensions

Victor Putz, Jorn Dunkel, Julia M. Yeomans

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Tags: Condensed matter, CUDA, nVidia, nVidia GeForce GTX 295, Physics, Soft Condensed Matter, Tesla C1060

November 11, 2010 by hgpu

Accelerating glassy dynamics using graphics processing units

Peter H. Colberg, Felix Hofling

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Tags: Computational Physics, CUDA, nVidia, nVidia GeForce GTX 280, Package, Physics, Soft Condensed Matter

November 8, 2010 by hgpu

Harvesting graphics power for MD simulations

J. A. van Meel, A. Arnold, D. Frenkel, Portegies S. F. Zwart, R. G. Belleman

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Tags: Condensed matter, CUDA, Molecular dynamics, nVidia, nVidia GeForce 8800 GTX, Soft Condensed Matter

November 3, 2010 by hgpu

Molecular Dynamics Simulation of Macromolecules Using Graphics Processing Unit

Ji Xu, Ying Ren, Wei Ge, Xiang Yu, Xiaozhen Yang, Jinghai Li

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Tags: CUDA, Macromolecule, Materials Science, Molecular dynamics, nVidia, nVidia GeForce GT 200, Soft Condensed Matter

November 3, 2010 by hgpu

Real-time optical manipulation of micron sized structures using GPU generated holograms

S. Bianchi, R. Di Leonardo

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Tags: Computer holography, CUDA, Mesoscale and Nanoscale Physics, nVidia, nVidia GeForce GTX 260, Optical trapping, Physics, Soft Condensed Matter

November 2, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Polymer Field-Theory Simulations on Graphics Processing Units

Thermal and Athermal Swarms of Self-Propelled Particles

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Anomalous Structure and Scaling of Ring Polymer Brushes

Highly accelerated simulations of glassy dynamics using GPUs: caveats on limited floating-point precision

Langevin dynamics simulations of biomolecules on graphics processors

CUDA simulations of active dumbbell suspensions

Accelerating glassy dynamics using graphics processing units

Harvesting graphics power for MD simulations

Molecular Dynamics Simulation of Macromolecules Using Graphics Processing Unit

Real-time optical manipulation of micron sized structures using GPU generated holograms

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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