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Brownian Dynamics of Active Sphere Suspensions Confined Near a No-Slip Boundary

Florencio Balboa Usabiaga, Blaise Delmotte, Aleksandar Donev

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Tags: Condensed matter, CUDA, nVidia, Package, Physics, pyCUDA, Soft Condensed Matter

December 6, 2016 by hgpu

GPU Based Detection of Topological Changes in Voronoi Diagrams

Massimo Bernaschi, Matteo Lulli, Mauro Sbragaglia

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Tags: Computational Physics, Condensed matter, CUDA, Lattice Boltzmann model, nVidia, Physics, Soft Condensed Matter, Voronoi diagram

July 8, 2016 by hgpu

Scalable Metropolis Monte Carlo for simulation of hard shapes

Joshua A. Anderson, M. Eric Irrgang, Sharon C. Glotzer

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Tags: Benchmarking, Chemistry, Condensed matter, CUDA, Monte Carlo simulation, nVidia, Physics, Soft Condensed Matter, Tesla K20

September 17, 2015 by hgpu

A parallel algorithm for implicit depletant simulations

Jens Glaser, Andrew S. Karas, Sharon C. Glotzer

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Tags: Condensed matter, CUDA, Molecular dynamics, nVidia, Package, Physics, Soft Condensed Matter, Tesla K20, Tesla K80

August 31, 2015 by hgpu

Spectral Ewald Acceleration of Stokesian Dynamics for polydisperse suspensions

Mu Wang, John F. Brady

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Tags: Computational Physics, CUDA, Fluid dynamics, nVidia, nVidia GeForce GTX 680, Physics, Soft Condensed Matter

July 1, 2015 by hgpu

Microbranching in mode-I fracture using large scale simulations of amorphous and perturbed lattice models

Shay I. Heizler, David A. Kessler

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Tags: Condensed matter, CUDA, nVidia, Soft Condensed Matter, Statistical Mechanics, Tesla

April 1, 2015 by hgpu

Scaling behavior of topologically constrained polymer rings in a melt

Benjamin Trefz, Peter Virnau

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Tags: Condensed matter, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 480, Soft Condensed Matter

December 16, 2014 by hgpu

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

Lorenzo Rovigatti, Petr Sulc, Istvan Z. Reguly, Flavio Romano

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, Package, Physics, Soft Condensed Matter, Tesla C2070, Tesla K10, Tesla K20

January 23, 2014 by hgpu

GALAMOST: GPU-accelerated large-scale molecular simulation toolkit

You-Liang Zhu, Hong Liu, Zhan-Wei Li, Hu-Jun Qian, Giuseppe Milano, Zhong-Yuan Lu

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Tags: Chemical Physics, Computational Physics, CUDA, Molecular simulation, nVidia, nVidia GeForce GTX 580, Phase transition, Physics, Soft Condensed Matter, Tesla K20

October 10, 2013 by hgpu

A minimal model for acoustic forces on Brownian particles

F. Balboa Usabiaga, R. Delgado-Buscalioni

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Tags: Condensed matter, CUDA, Finite volume method, nVidia, Package, Soft Condensed Matter

July 3, 2013 by hgpu

Inertial Coupling Method for particles in an incompressible fluctuating fluid

F. Balboa Usabiaga, R. Delgado-Buscalioni, B. E. Griffith, A. Donev

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Tags: Condensed matter, CUDA, FFT, nVidia, Soft Condensed Matter

January 2, 2013 by hgpu

Quasi-real-time analysis of dynamic near field scattering data using a graphics processing unit

Giovanni Cerchiari, Fabrizio Croccolo, Frederic Cardinaux, Frank Scheffold

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Tags: CUDA, Data acquisition, Microscopy, nVidia, Optics, Physics, Soft Condensed Matter, Tesla C2050

September 18, 2012 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Brownian Dynamics of Active Sphere Suspensions Confined Near a No-Slip Boundary

GPU Based Detection of Topological Changes in Voronoi Diagrams

Scalable Metropolis Monte Carlo for simulation of hard shapes

A parallel algorithm for implicit depletant simulations

Spectral Ewald Acceleration of Stokesian Dynamics for polydisperse suspensions

Microbranching in mode-I fracture using large scale simulations of amorphous and perturbed lattice models

Scaling behavior of topologically constrained polymer rings in a melt

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

GALAMOST: GPU-accelerated large-scale molecular simulation toolkit

A minimal model for acoustic forces on Brownian particles

Inertial Coupling Method for particles in an incompressible fluctuating fluid

Quasi-real-time analysis of dynamic near field scattering data using a graphics processing unit

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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