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Polymer Field-Theory Simulations on Graphics Processing Units

Kris T. Delaney, Glenn H. Fredrickson

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Tags: Computational Physics, CUDA, Field equations, MPI, nVidia, Physics, Polymer Systems, Soft Condensed Matter, Statistical Mechanics, Tesla C2050

April 25, 2012 by hgpu

LAMMPScuda – a new GPU accelerated Molecular Dynamics Simulations Package and its Application to Ion-Conducting Glasses

Christian Robert Trott

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Source codes

Tags: Biology, Computational Physics, CUDA, Heterogeneous systems, Molecular dynamics, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 470, Package, Physics, Polymer Systems, Tesla C1060, Thesis

February 13, 2012 by hgpu

A GPU approach to parallel replica-exchange polymer simulations

Jonathan Gross, Wolfhard Janke, Michael Bachmann

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Tags: CUDA, Monte Carlo simulation, nVidia, Physics, Polymer Systems, Programming techniques

September 27, 2011 by hgpu

Massively parallelized replica-exchange simulations of polymers on GPUs

Jonathan Gross, Wolfhard Janke, Michael Bachmann

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Tags: Biomolecules, Computational Physics, Condensed matter, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Physics, Polymer Systems, Tesla C1060

July 19, 2011 by hgpu

General purpose molecular dynamics simulations fully implemented on graphics processing units

J. Anderson, C. Lorenz, A. Travesset

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Tags: Chemistry, CUDA, GPU cluster, Molecular dynamics, nVidia, nVidia GeForce 8800 GTX, Physics, Polymer Systems

November 2, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Polymer Field-Theory Simulations on Graphics Processing Units

LAMMPScuda – a new GPU accelerated Molecular Dynamics Simulations Package and its Application to Ion-Conducting Glasses

A GPU approach to parallel replica-exchange polymer simulations

Massively parallelized replica-exchange simulations of polymers on GPUs

General purpose molecular dynamics simulations fully implemented on graphics processing units

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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