high performance computing on graphics processing units: hgpu.org

The performance portability of OpenCL kernel implementations for common memory bandwidth limited linear algebra operations across different hardware generations of the same vendor as well as across vendors is studied. Certain combinations of kernel implementations and work sizes are found to exhibit good performance across compute kernels, hardware generations, and, to a lesser degree, vendors. […]

General Purpose Graphics Computing Units can be effectively used for enhancing the performance of many contemporary scientific applications. However, programming GPUs using machine-specific notations like CUDA or OpenCL can be complex and time consuming. In addition, the resulting programs are typically fine-tuned for a particular target device. A promising alternative is to program in a […]

Previous deterministic replay systems reduce the runtime overhead by either relying on hardware support or by relaxing the determinism requirements for replay. We propose LightPlay that fulfills stricter determinism requirements with low overhead without requiring hardware or OS support. LightPlay guarantees that the memory state after each instruction instance in a replay run is the […]

General-purpose computation on graphics processing units (GPGPU) has great potential to accelerate many scientific models and algorithms. However, some problems are considerably more difficult to accelerate than others, and it may be challenging for those new to GPGPU to ascertain the difficulty of accelerating a particular problem. Through what was learned in the acceleration of […]

We present speculative parallelization techniques that can exploit parallelism in loops even in the presence of dynamic irregularities that may give rise to cross-iteration dependences. The execution of a speculatively parallelized loop consists of five phases: scheduling, computation, misspeculation check, result committing, and misspeculation recovery. While the first two phases enable exploitation of data parallelism, […]

PyFR is an open-source high-order accurate computational fluid dynamics solver for mixed unstructured grids that can target a range of hardware platforms from a single codebase. In this paper we demonstrate the ability of PyFR to perform high-order accurate unsteady simulations of flow on mixed unstructured grids using heterogeneous multi-node hardware. Specifically, after benchmarking single-node […]

Graph databases use graph structures to store data sets as nodes, edges, and properties. They are used to store and search the relationships between a large number of nodes, such as social networking services and recommendation engines that use customer social graphs. Since computation cost for graph search queries increases as the graph becomes large, […]

Biomedical image reconstruction applications require producing high fidelity images in or close to real-time. We have implemented reconstruction of three dimensional conebeam computed tomography(CBCT) with two dimensional projections. The algorithm takes slices of the target, weights and filters them to backproject the data, then creates the final 3D volume. We have implemented the algorithm using […]

GPU implementations of HPC applications relying on finite difference methods can include tens of kernels that are memory-bound. Kernel fusion can improve performance by reducing data traffic to off-chip memory; kernels that share data arrays are fused to larger kernels where on-chip cache is used to hold the data reused by instructions originating from different […]

Over the past decade, the design of microprocessors has been shifting to a new model where the microprocessor has multiple homogeneous processing units, aka cores, as a result of heat dissipation and energy consumption issues. Meanwhile, the demand for heterogeneity increases in computing systems due to the need for high performance computing in recent years. […]

We show that surface normal information allows to significantly improve the accuracy of a spatio-temporal multi-view reconstruction. On one hand, normal information can improve the quality of photometric matching scores. On the other hand, the same normal information can be employed to drive an adaptive anisotropic surface regularization process which better preserves fine details and […]

GPU computing has become popular in computational finance and many financial institutions are moving their CPU based applications to the GPU platform. Since most Monte Carlo algorithms are embarrassingly parallel, they benefit greatly from parallel implementations, and consequently Monte Carlo has become a focal point in GPU computing. GPU speed-up examples reported in the literature […]