The Gyrokinetic Toroidal Code at Princeton (GTC-P) is a highly scalable and portable particle-in-cell (PIC) code. It solves the 5D Vlasov-Poisson equation featuring efficient utilization of modern parallel computer architectures at the petascale and beyond. Motivated by the goal of developing a modern code capable of dealing with the physics challenge of increasing problem size […]

October 25, 2015 by hgpu

Fast Poisson solvers using the Fast Fourier Transform on uniform grids are especially suited for parallel implementation, making them appropriate for portability on graphical processing unit (GPU) devices. The goal of the following work was to implement, test, and evaluate a fast Poisson solver for periodic boundary conditions for use on a variety of GPU […]

November 3, 2014 by hgpu

An emerging trend in processor architecture seems to indicate the doubling of the number of cores per chip every two years with same or decreased clock speed. Of particular interest to this thesis is the class of many-core processors, which are becoming more attractive due to their high performance, low cost, and low power consumption. […]

October 22, 2014 by hgpu

This paper describes a hybrid multicore/GPU solver for the incompressible Navier-Stokes equations with constant coefficients, discretized by the finite difference method. By applying the prediction-projection method, the Navier-Stokes equations are transformed into a combination of Helmholtzlike and Poisson equations for which we describe efficient solvers. As an extension of our previous paper [1], this paper […]

September 4, 2014 by hgpu

In this paper, we discuss an efficient implementation of the three-dimensional multigrid Poisson solver on a many-core coprocessor, Intel Xeon Phi. We have used the modified block red-black (mBRB) Gauss-Seidel (GS) smoother to achieve sufficient degree of parallelism and high cache hit ratio. We have vectorized (SIMDized) the GS steps in the smoother by introducing […]

July 4, 2014 by hgpu

We present GPU implementations of two fast force calculation methods, based on series expansions of the Poisson equation. One is the Self-Consistent Field (SCF) method, which is a Fourier-like expansion of the density field in some basis set; the other is the Multipole Expansion (MEX) method, which is a Taylor-like expansion of the Green’s function. […]

June 18, 2014 by hgpu

Graphics Processing Units (GPUs), originally developed for computer games, now provide computational power for scientific applications. A study on the comparison of computational speed-up and efficiency of a GPU with a CPU for the Finite Pointset Method (FPM), which is a numerical tool in Computational Fluid Dynamics (CFD) is presented. As FPM is based on […]

January 19, 2014 by hgpu

We investigated the possible way for treatment of electrostatic interactions by solving numerically Poisson’s equation using Conjugate Gradient method and Stabilized BiConjugate Gradient method. The aim of the research was to test the execution time of prototype programs running on BLueGene/P and CPU/GPU system. The results show that the tested methods are applicable for electrostatics […]

December 11, 2013 by hgpu

In this paper a new scalable hydrodynamic code GPUPEGAS (GPU-accelerated PErformance Gas Astrophysic Simulation) for simulation of interacting galaxies is proposed. The code is based on combination of Godunov method as well as on the original implementation of FlIC method, specially adapted for GPU-implementation. Fast Fourier Transform is used for Poisson equation solution in GPUPEGAS. […]

November 6, 2013 by hgpu

Graphics Processing Units (GPUs) have emerged as highly capable computational accelerators for scientific and engineering applications. Many reports claim orders of magnitude of speedup compared to traditional Central Processing Units (CPUs), and the interest for GPU computation is high in the computational world. In this thesis, the capability of using GPUs to accelerate the full […]

October 19, 2013 by hgpu

This thesis is a comprehensive account of my experiences implementing the Lattice Boltzmann Method (LBM) for the purpose of simulating multiphase flows relevant to Air Conditioning and Refrigeration Center (ACRC) applications. Other methodologies have been used to simulate multiphase flow including finite volume based Navier-Stokes solvers. These methods have found reasonable success in simulating multiphase […]

August 26, 2013 by hgpu

Solving a banded linear system efficiently is important to many scientific and engineering applications. Current solvers achieve good scalability only on the linear systems that can be partitioned into independent subsystems. In this paper, we present a GPU based, scalable Bi-Conjugate Gradient Stabilized solver that can be used to solve a wide range of banded […]

August 16, 2013 by hgpu