high performance computing on graphics processing units: hgpu.org

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hgpu.org » Applications » Mathematics

Iterative Hard Thresholding for Model Selection in Genome-Wide Association Studies

Kevin L. Keys, Gary K. Chen, Kenneth Lange

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Tags: Bioinformatics, Genetics, Machine learning, nVidia, OpenCL, Package, Statistics, Tesla C2050

August 8, 2016 by hgpu

Fast hyperbolic Radon transform represented as convolutions in log-polar coordinates

Viktor V. Nikitin, Fredrik Andersson, Marcus Carlsson, Anton A. Duchkov

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Tags: CUDA, FFT, Geoscience, Mathematics, Numerical Analysis, nVidia, Radon transform, Seismic modeling

May 3, 2016 by hgpu

GPU-accelerated stochastic predictive control of drinking water networks

Ajay K. Sampathirao, Pantelis Sopasakis, Alberto Bemporad, Panagiotis Patrinos

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Tags: CUDA, Mathematics, nVidia, Tesla C2075

April 6, 2016 by hgpu

GPU-accelerated Bernstein-Bezier discontinuous Galerkin methods for wave problems

Jesse Chan, T. Warburton

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Tags: Mathematics, Numerical Analysis, nVidia, nVidia GeForce GTX 980, OCCA

December 22, 2015 by hgpu

A parallel algorithm for the constrained shortest path problem on lattice graphs

Ivan Matic

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Tags: Algorithms, AMD Radeon R9 290X, Mathematics, OpenCL, Path problems

November 24, 2015 by hgpu

Multi-dimensional Functional Principal Component Analysis

Lu-Hung Chen, Ci-Ren Jiang

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Tags: FFT, nVidia, nVidia GeForce GTX 980, nVidia Quadro K600, OpenACC, Statistics

October 16, 2015 by hgpu

Partitioning Large Scale Deep Belief Networks Using Dropout

Yanping Huang, Sai Zhang

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Tags: Benchmarking, Databases, Deep learning, Machine learning, nVidia, nVidia GeForce 8800 GS, Python, Statistics

August 31, 2015 by hgpu

GPU-accelerated discontinuous Galerkin methods on hybrid meshes

Jesse Chan, Zheng Wang, Axel Modave, Jean-Francois Remacle, T. Warburton

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Tags: CUDA, Mathematics, Numerical Analysis, nVidia, nVidia GeForce GTX 980, OpenCL, OpenMP, Spectral elements, Wave equation

July 13, 2015 by hgpu

Accelerated dimension-independent adaptive Metropolis

Yuxin Chen, David Keyes, Kody J.H. Law, Hatem Ltaief

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Tags: CUDA, nVidia, Probability, Statistics, Tesla K40

June 19, 2015 by hgpu

Sequential Monte Carlo Optimisation for Air Traffic Management

A.J. Eele, J.M. Maciejowski

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Tags: Algorithms, CUDA, Mathematics, nVidia, nVidia GeForce GTX 580, Optimization, Tesla C2070

June 10, 2015 by hgpu

A Parallel Implementation of the Galerkin Method for Solving Partial Differential Equations on a Triangular Mesh

Rachel N. Hess

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Tags: Differential equations, FEM, Finite element method, Mathematics, OpenCL, Partial differential equations, PDEs, PyOpenCL, Thesis, Triangular meshes

June 7, 2015 by hgpu

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

Fredrik Andersson, Marcus Carlsson, Viktor V. Nikitin

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Tags: Algorithms, CUDA, FFT, Image processing, Mathematics, Numerical Analysis, nVidia, nVidia GeForce GTX 770, Radon transform

June 5, 2015 by hgpu

CATO: automatic source transformation to apply HPC frameworks with minimal user interaction

Compiler-assisted distribution of OpenMP code for improved scalability

ADIOS2.jl: a Julia interface to ADIOS2

Julia as a unifying end-to-end workflow language on the Frontier exascale system

Code generated HPC Kernels Using Llama-2-70b

Comparing Llama-2 and GPT-3 LLMs for HPC kernels generation

Scope is all you need: Transforming LLMs for HPC Code

pocl - Portable Computing Language

PoCL-R: An Open Standard Based Offloading Layer for Heterogeneous Multi-Access Edge Computing with Server Side Scalability

HPAC-Offload: Accelerating HPC Applications with Portable Approximate Computing on the GPU

openCLDispatcher

Novel insights on atomic synchronization for sort-based group-by on GPUs

CEED Benchmarks

Performant low-order matrix-free finite element kernels on GPU architectures

Sieve: Stratified GPU-Compute Workload Sampling

EngineCL: Usability and Performance in Heterogeneous Computing

Mashing load balancing algorithm to boost hybrid kernels in molecular dynamics simulations

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high performance computing on graphics processing units: hgpu.org

Applications

Iterative Hard Thresholding for Model Selection in Genome-Wide Association Studies

Fast hyperbolic Radon transform represented as convolutions in log-polar coordinates

GPU-accelerated stochastic predictive control of drinking water networks

GPU-accelerated Bernstein-Bezier discontinuous Galerkin methods for wave problems

A parallel algorithm for the constrained shortest path problem on lattice graphs

Multi-dimensional Functional Principal Component Analysis

Partitioning Large Scale Deep Belief Networks Using Dropout

GPU-accelerated discontinuous Galerkin methods on hybrid meshes

Accelerated dimension-independent adaptive Metropolis

Sequential Monte Carlo Optimisation for Air Traffic Management

A Parallel Implementation of the Galerkin Method for Solving Partial Differential Equations on a Triangular Mesh

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

Recent source codes

CATO: automatic source transformation to apply HPC frameworks with minimal user interaction

ADIOS2.jl: a Julia interface to ADIOS2

Code generated HPC Kernels Using Llama-2-70b

Scope is all you need: Transforming LLMs for HPC Code

pocl - Portable Computing Language

HPAC-Offload: Accelerating HPC Applications with Portable Approximate Computing on the GPU

openCLDispatcher

CEED Benchmarks

Sieve: Stratified GPU-Compute Workload Sampling

EngineCL: Usability and Performance in Heterogeneous Computing

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