high performance computing on graphics processing units: hgpu.org

Packages

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GPU-BLAST: Using graphics processors to accelerate protein sequence alignment

Panagiotis D. Vouzis, Nikolaos V. Sahinidis

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Tags: Bioinformatics, Biology, BLAST, CUDA, nVidia, Package, Sequence alignment, Tesla C2050

November 30, 2010 by hgpu

Shader algebra

Michael Mccool, Stefanus Du Toit, Tiberiu Popa, Bryan Chan, Kevin Moule

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Tags: 3D Graphics and Realism, Computer science, nVidia, OpenGL, Package, Rendering, Shaders

November 29, 2010 by hgpu

A flexible simulation framework for graphics architectures

J. W. Sheaffer, D. Luebke, K. Skadron

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Tags: Computer science, Energy-efficient computing, nVidia, nVidia GeForce 4, OpenGL, Package

November 29, 2010 by hgpu

StarPU: A Unified Platform for Task Scheduling on Heterogeneous Multicore Architectures

Cedric Augonnet, Samuel Thibault, Raymond Namyst, Pierre-Andre Wacrenier

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Tags: Computer science, CUDA, Distributed computing, nVidia, nVidia Quadro FX 4600, Package, Performance

November 28, 2010 by hgpu

Highly accelerated feature detection in proteomics data sets using modern graphics processing units

Rene Hussong, Barbara Gregorius, Andreas Tholey, Andreas Hildebrandt

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Tesla C870

November 28, 2010 by hgpu

Fast Disk Encryption through GPGPU Acceleration

Giovanni Agosta, Alessandro Barenghi, Fabrizio D. Santis, Andrea D. Biagio, Gerardo Pelosi

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 260, Package, Security

November 26, 2010 by hgpu

Synergistic execution of stream programs on multicores with accelerators

Abhishek Udupa, R. Govindarajan, Matthew J. Thazhuthaveetil

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Tags: Computer science, CUDA, High-level Languages, nVidia, nVidia GeForce 8800 GTS, Package

November 23, 2010 by hgpu

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

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Tags: Biology, Computer science, CUDA, Error recovery, nVidia, Package

November 22, 2010 by hgpu

Parallel Position Weight Matrices Algorithms

Mathieu Giraud, Jean-Stephane Varre

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Tags: Biology, Computer science, CUDA, nVidia, nVidia GeForce 8800, nVidia GeForce GTX 280, Package

November 22, 2010 by hgpu

GPGPU computation and visualization of three-dimensional cellular automata

Stephane Gobron, Arzu Coltekin, Herve Bonafos and Daniel Thalmann

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Tags: Cellular automata, Computer science, Medicine, nVidia, nVidia GeForce 8800 GTX, OpenGL, Package, Visualization

November 20, 2010 by hgpu

Accelerating numerical solution of stochastic differential equations with CUDA

M. Januszewski, M. Kostur

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Tags: Computational Physics, CUDA, Diffusion equation, nVidia, Package, Physics, Tesla C1060

November 19, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Packages

GPU-BLAST: Using graphics processors to accelerate protein sequence alignment

Shader algebra

A flexible simulation framework for graphics architectures

StarPU: A Unified Platform for Task Scheduling on Heterogeneous Multicore Architectures

Highly accelerated feature detection in proteomics data sets using modern graphics processing units

Fast Disk Encryption through GPGPU Acceleration

Synergistic execution of stream programs on multicores with accelerators

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Parallel Position Weight Matrices Algorithms

GPGPU computation and visualization of three-dimensional cellular automata

Accelerating numerical solution of stochastic differential equations with CUDA

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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