high performance computing on graphics processing units: hgpu.org

Applications

hgpu.org » Applications

The scoring sequences on profile Hidden Markov Models with delete states elimination by GPUs

Jun Li, Yanhui Li, Shuangping Chen

Tags: Bioinformatics, Computer science, nVidia, nVidia GeForce 9800 GTX, Sequence alignment

June 10, 2011 by hgpu

Real-time rain simulation in cartoon style

Zhong-Xin Feng, Min Tang, Jin-Xiang Dong, Shang-Ching Chou

Tags: 3D Graphics and Realism, Collision detection, Computer science, Real-time graphics, Rendering, Visualization

June 10, 2011 by hgpu

Real-time rendering of large-scale tree scene

Huai Yongjian, Zeng Xi, Yu Peng, Li Jingli

Tags: 3D Graphics and Realism, Computer science, Real-time graphics, Rendering, Visualization

June 10, 2011 by hgpu

Handwritten Digit Recognition with a Committee of Deep Neural Nets on GPUs

Dan C. Ciresan, Ueli Meier, Luca M. Gambardella, Jurgen Schmidhuber

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Tags: Artificial intelligence, Computer vision, Image processing, Image recognition, Neural networks, nVidia, nVidia GeForce GTX 480

June 10, 2011 by hgpu

Single molecule detection of tuberculosis nucleic acid using dark field Tethered Particle Motion

Sanneke Brinkers, Heidelinde R.C. Dietrich, Sjoerd Stallinga, Jurriaan J. Mes, Ian T. Young, Bernd Rieger

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Tags: Algorithms, Biology, Biophysics, RNA

June 9, 2011 by hgpu

cuGWAM: Genome-wide association multifactor dimensionality reduction using CUDA-enabled high-performance graphics processing unit

Min-Seok Kwon, Kyunga Kim, Sungyoung Lee, Taesung Park

Source codes

Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, Package

June 9, 2011 by hgpu

Low-Frequency MLFMA on Graphics Processors

M. Cwikla, J. Aronsson, V. Okhmatovski

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Tags: CUDA, Electrodynamics, Fast multipole method, nVidia, nVidia Quadro FX 5800

June 9, 2011 by hgpu

Adaptive Optimization for Petascale Heterogeneous CPU/GPU Computing

Canqun Yang, Feng Wang, Yunfei Du, Juan Chen, Jie Liu, Huizhan Yi, Kai Lu

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Tags: ATI, ATI Radeon HD 4870, ATI Stream, Computer science, Heterogeneous systems, Linear Algebra, Optimization, Presentation

June 9, 2011 by hgpu

SAR focusing of P-band ice sounding data using back-projection

Anders Kusk, Jorgen Dall

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Tags: CUDA, Earth and Space Sciences, nVidia, nVidia GeForce GTX 260

June 9, 2011 by hgpu

The Graphics Processor as a Mathematical Coprocessor in MATLAB

Andre Rigland Brodtkorb

Tags: Computer science, Linear Algebra, Matrix multiplication

June 9, 2011 by hgpu

Shader-based visual simulation of ocean wave

Jun Chen, Yuan Yuan, Jianwen Yang

Tags: 3D Graphics and Realism, Computer science, Rendering, Visualization

June 9, 2011 by hgpu

Parallelism of Clonal Selection for PSP on CUDA

Hongbing Zhu, Heng Xiao, JinGuang Gu

Tags: Biology, CUDA, Macromolecule, nVidia

June 9, 2011 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

The scoring sequences on profile Hidden Markov Models with delete states elimination by GPUs

Real-time rain simulation in cartoon style

Real-time rendering of large-scale tree scene

Handwritten Digit Recognition with a Committee of Deep Neural Nets on GPUs

Single molecule detection of tuberculosis nucleic acid using dark field Tethered Particle Motion

cuGWAM: Genome-wide association multifactor dimensionality reduction using CUDA-enabled high-performance graphics processing unit

Low-Frequency MLFMA on Graphics Processors

Adaptive Optimization for Petascale Heterogeneous CPU/GPU Computing

SAR focusing of P-band ice sounding data using back-projection

The Graphics Processor as a Mathematical Coprocessor in MATLAB

Shader-based visual simulation of ocean wave

Parallelism of Clonal Selection for PSP on CUDA

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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