high performance computing on graphics processing units: hgpu.org

Programming

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Accelerating large-scale protein structure alignments with graphics processing units

Bin Pang, Nan Zhao, Michela Becchi, Dmitry Korkin, Chi-Ren Shyu

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Tags: Bioinformatics, Biology, CUDA, Java, nVidia, Package, Tesla C2050

June 30, 2012 by hgpu

Performance of GPU for Pricing Financial Derivatives: Convertible Bonds

Yuh-Dauh Lyuu, Kuo-Wei Wen, Yi-Chun Wu

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Tags: CUDA, Finance, nVidia, nVidia GeForce 8800 GTS

June 30, 2012 by hgpu

Point Based Color Bleeding with CUDA and Caching

Nick Feeney

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Tags: 3D Graphics and Realism, Algorithms, Computer science, CUDA, nVidia, Rasterization

June 30, 2012 by hgpu

Adaptive Sequential Posterior Simulators for Massively Parallel Computing Environments

Garland Durham, John Gewekey

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Tags: Algorithms, Bayesian, CUDA, Finance, nVidia, nVidia GeForce GTX 570

June 29, 2012 by hgpu

A Parallel Image Segmentation Algorithm on GPUs

P. N. Happ, R. Q. Feitosa, C. Bentes, R. Farias

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Tags: CUDA, Image processing, nVidia, nVidia GeForce 9600 GT, Tesla C1060

June 29, 2012 by hgpu

Shallow Water Simulation on GPUs for Sparse Domains

Martin L. Saetra

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Tags: CUDA, Fluid dynamics, nVidia, Partial differential equations, PDEs

June 29, 2012 by hgpu

An Optimized Large-Scale Hybrid DGEMM Design for CPUs and ATI GPUs

Jiajia Li, Xingjian Li, Guangming Tan, Mingyu Chen, Ninghui Sun

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Tags: Algorithms, ATI, ATI CAL, ATI Radeon HD 5970, ATI Stream, Computer science, Heterogeneous systems, Matrix multiplication, Optimization, Package

June 29, 2012 by hgpu

GPUs as an Opportunity for Offloading Garbage Collection

Martin Maas, Philip Reames, Jeffrey Morlan, Krste Asanovic, Anthony D. Joseph, John Kubiatowicz

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Tags: Algorithms, APU, Computer science, Memory, OpenCL, Performance

June 29, 2012 by hgpu

Explicit Shallow Water Simulations on GPUs: Guidelines and Best Practices

Andre R. Brodtkorb, Martin L. Saetra

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 580

June 27, 2012 by hgpu

Software Performance Analysis with Parallel Programming Approaches

Suneeta H. Angadi, G. T. Raju, Abhishek B

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Tags: Computer science, Matrix multiplication, OpenCL, OpenMP, Optimization, Performance

June 27, 2012 by hgpu

Solving Molecular Distance Geometry Problems in OpenCL

Istvan Lorentz, Razvan Andonie, Levente Fabry-Asztalos

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Tags: Chemistry, Computational chemistry, Molecular modeling, nVidia, nVidia GeForce GTX 560 Ti, OpenCL

June 27, 2012 by hgpu

OpenCL Floating Point Software on Heterogeneous Architectures – Portable or Not?

Miriam Leeser, Jaideep Ramachandran, Thomas Wahl, Devon Yablonski

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Tags: Computer science, Heterogeneous systems, OpenCL

June 27, 2012 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

Accelerating large-scale protein structure alignments with graphics processing units

Performance of GPU for Pricing Financial Derivatives: Convertible Bonds

Point Based Color Bleeding with CUDA and Caching

Adaptive Sequential Posterior Simulators for Massively Parallel Computing Environments

A Parallel Image Segmentation Algorithm on GPUs

Shallow Water Simulation on GPUs for Sparse Domains

An Optimized Large-Scale Hybrid DGEMM Design for CPUs and ATI GPUs

GPUs as an Opportunity for Offloading Garbage Collection

Explicit Shallow Water Simulations on GPUs: Guidelines and Best Practices

Software Performance Analysis with Parallel Programming Approaches

Solving Molecular Distance Geometry Problems in OpenCL

OpenCL Floating Point Software on Heterogeneous Architectures – Portable or Not?

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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