high performance computing on graphics processing units: hgpu.org

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Parallel Level set algorithm with MPI and accelerated on GPU

Zhenlin Wang

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Tags: Computational Physics, CUDA, Finite difference, MPI, nVidia, Package, PDEs, Physics

December 17, 2016 by hgpu

dMath: Distributed Linear Algebra for DL

Steven Eliuk, Cameron Upright, Hars Vardhan, Stephen Walsh, Trevor Gale

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Tags: Algorithms, Computer science, CUDA, Deep learning, Linear Algebra, Matrix multiplication, MPI, Neural networks, nVidia, Tesla K80

November 25, 2016 by hgpu

Optimization and Evaluation of VLPL-S Particle-in-cell Code on Knights Landing

Dandi Ding, Minhua Wen, Shan Zhou, Min Chen, James Lin

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Tags: Intel Xeon Phi, MPI, OpenMP, Particle-in-cell methods, Physics, Plasma physics

November 23, 2016 by hgpu

GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Ansel L. Blumers, Yu-Hang Tang, Zhen Li, Xuejin Li, George E. Karniadakis

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Tags: Biological Physics, Computational Physics, CUDA, MPI, nVidia, Package, Physics, Tesla K20

November 22, 2016 by hgpu

Efficient Communications in Training Large Scale Neural Networks

Linnan Wang, Wei Wu, George Bosilca, Richard Vuduc, Zenglin Xu

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Tags: Caffe, Computer science, CUDA, Deep learning, MPI, Neural networks, nVidia, OpenMPI, Performance

November 16, 2016 by hgpu

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

Jerry Watkins, Irina Tezaur

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Tags: CUDA, Earth and Space Sciences, MPI, nVidia, OpenMP, performance portability, Physics, Tesla K20, Tesla K80

November 8, 2016 by hgpu

MILC staggered conjugate gradient performance on Intel KNL

Carleton DeTar, Douglas Doerfler, Steven Gottlieb, Ashish Jha, Dhiraj Kalamkar, Ruizi Li, Doug Toussaint

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Tags: Computational Physics, Data parallelism, High Energy Physics - Lattice, Intel Xeon Phi, MPI, OpenMP, Physics

November 3, 2016 by hgpu

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

Vladimir Loncar, Luis E. Young-S., Srdjan Skrbic, Paulsamy Muruganandam, Sadhan K. Adhikari, Antun Balaz

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Tags: Condensed matter, CUDA, MPI, nVidia, OpenMP, Package, Physics, Tesla M2090

October 22, 2016 by hgpu

BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images

Pilar Cossio, David Rohr, Fabio Baruffa, Markus Rampp, Volker Lindenstruth, Gerhard Hummer

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Tags: Bayesian, Biology, Biomolecules, CUDA, Electron microscopy, Heterogeneous systems, Medicine, Microscopy, MPI, nVidia, nVidia GeForce GTX Titan, OpenMP, Package, Tesla K20, Tomography

October 8, 2016 by hgpu

MCS 572: Introduction to Supercomputing

Jan Verschelde

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Tags: Algorithms, Computer science, CUDA, MPI, Numerical Analysis, nVidia, nVidia GeForce 9400 M, OpenMP, Package, Tesla C2050, Tesla C2070, Tesla K20, Tutorial

September 22, 2016 by hgpu

An efficient numerical method for solving the Boltzmann equation in multidimensions

Giacomo Dimarco, Raphael Loubere, Jacek Narski, Thomas Rey

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Tags: Algorithms, Boltzmann equation, cfd, CUDA, Fluid dynamics, Mathematics, MPI, Numerical Analysis, nVidia, OpenMP, Physics

September 13, 2016 by hgpu

OpenSBLI: A framework for the automated derivation and parallel execution of finite difference solvers on a range of computer architectures

Christian T. Jacobs, Satya P. Jammy, Neil D. Sandham

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Tags: cfd, Code generation, Computer science, CUDA, Finite difference, Fluid dynamics, Mathematical Software, MPI, nVidia, OpenCL, Tesla K40

September 10, 2016 by hgpu

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

Shamrock: Multi-GPU hydrodynamics for astrophysics

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

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high performance computing on graphics processing units: hgpu.org

Parallel Level set algorithm with MPI and accelerated on GPU

dMath: Distributed Linear Algebra for DL

Optimization and Evaluation of VLPL-S Particle-in-cell Code on Knights Landing

GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Efficient Communications in Training Large Scale Neural Networks

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

MILC staggered conjugate gradient performance on Intel KNL

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images

MCS 572: Introduction to Supercomputing

An efficient numerical method for solving the Boltzmann equation in multidimensions

OpenSBLI: A framework for the automated derivation and parallel execution of finite difference solvers on a range of computer architectures

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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