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Accelerating Dissipative Particle Dynamics Simulations on GPUs: Algorithms, Numerics and Applications

Yu-Hang Tang, George Em Karniadakis

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Tags: Algorithms, Computational Physics, Computer science, CUDA, MPI, nVidia, Tesla K20

November 6, 2013 by hgpu

OpenCUDA+MPI: A Framework for Heterogeneous GP-GPU Distributed Computing

Kenny Ballou, Nilab Mohammad Mousa

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Tags: Computer science, CUDA, Distributed computing, Heterogeneous systems, MPI, nVidia

November 4, 2013 by hgpu

An MPI-CUDA Implementation for the Compression of DEM

Zeng Fei, Chen Yumin

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Tags: CUDA, Discrete Wavelet Transform, Earth and Space Sciences, Geoscience, GPU cluster, MPI, nVidia, nVidia GeForce GT 650 M

November 2, 2013 by hgpu

Extension of the SkePU Skeleton Programming Framework for Multi-core CPU and Multi-GPU Systems for MPI-based Clusters

Swadhin K. Mangaraj

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Tags: Computer science, CUDA, GPU cluster, High-level Languages, MPI, nVidia, OpenCL, Thesis

October 29, 2013 by hgpu

MPI Parallelization of GPU-based Lattice Boltzmann Simulations

Arash Bakhtiari

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Tags: Fluid dynamics, GPU cluster, Heterogeneous systems, Lattice Boltzmann model, MPI, nVidia, OpenCL, Tesla M2090, Thesis

October 27, 2013 by hgpu

Scalable Simulation of Tsunamis Generated by Submarine Landslides on GPU clusters

M. de la Asuncion, J. M. Mantas, M. J. Castro, S. Ortega

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Tags: CUDA, Earth and Space Sciences, Fluid dynamics, GPU cluster, MPI, nVidia, Tesla M2090

October 26, 2013 by hgpu

Moim: A Multi-GPU MapReduce Framework

Mengjun Xie, Kyoung-Don Kang, Can Basaran

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Tags: Computer science, CUDA, MapReduce, MPI, nVidia, nVidia GeForce GTX 580, Thrust

October 21, 2013 by hgpu

Heterogeneous Clustering with Homogeneous Code: Accelerate MPI Applications Without Code Surgery Using Intel Xeon Phi Coprocessors

Andrey Vladimirov and Vadim Karpusenko

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Tags: Heterogeneous systems, Intel Phi, Intel Xeon Phi, Monte Carlo simulation, MPI, Portability, Task scheduling

October 18, 2013 by Andrey Vladimirov

Coupling a Generalized DEM and an SPH Models Under a Heterogeneous Massively Parallel Framework

Ricardo Canelas, Jose M. Dominguez, Rui M. L. Ferreira

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Tags: CUDA, Fluid dynamics, Heterogeneous systems, MPI, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, nVidia GeForce GTX 680

October 12, 2013 by hgpu

The GASPI API specification and its implementation GPI 2.0

D. Grünewald, C. Simmendinger

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Source codes

Tags: Computer science, Intel Xeon Phi, MPI, Package, Programming Languages

October 9, 2013 by hgpu

High-Order Algorithms for Compressible Reacting Flow with Complex Chemistry

M. Emmett, W. Zhang, J. B. Bell

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Tags: Fluid dynamics, Intel Xeon Phi, Mathematics, MPI, Navier-Stokes equations, NSEs, Numerical Analysis, Numerical simulation, OpenMP

October 9, 2013 by hgpu

A GPU cluster optimized multigrid scheme for computing unsteady incompressible fluid flow

Gyorgy Tegze, Gyula I. Toth

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Tags: ATI, ATI Radeon HD 7970, Fluid dynamics, GPU cluster, Mathematics, MPI, Numerical Analysis, Numerical simulation, nVidia, nVidia GeForce GTX 680, OpenCL

September 30, 2013 by hgpu

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

PyOMP: Parallel programming for CPUs and GPUs with OpenMP and Python

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

Understanding GEMM Performance and Energy on NVIDIA Ada Lovelace: A Machine Learning-Based Analytical Approach

HiRep

Scaling SU(2) to 1000 GPUs using HiRep

Gaia AVU-GSR

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

gpuPairHMM: High-speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Accelerating Dissipative Particle Dynamics Simulations on GPUs: Algorithms, Numerics and Applications

OpenCUDA+MPI: A Framework for Heterogeneous GP-GPU Distributed Computing

An MPI-CUDA Implementation for the Compression of DEM

Extension of the SkePU Skeleton Programming Framework for Multi-core CPU and Multi-GPU Systems for MPI-based Clusters

MPI Parallelization of GPU-based Lattice Boltzmann Simulations

Scalable Simulation of Tsunamis Generated by Submarine Landslides on GPU clusters

Moim: A Multi-GPU MapReduce Framework

Heterogeneous Clustering with Homogeneous Code: Accelerate MPI Applications Without Code Surgery Using Intel Xeon Phi Coprocessors

Coupling a Generalized DEM and an SPH Models Under a Heterogeneous Massively Parallel Framework

The GASPI API specification and its implementation GPI 2.0

High-Order Algorithms for Compressible Reacting Flow with Complex Chemistry

A GPU cluster optimized multigrid scheme for computing unsteady incompressible fluid flow

Recent source codes

tdg-benchs: benchmarks used to test the performance of taskgraph

SW#SYCL

LLOR: Automatic Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

HiRep

Gaia AVU-GSR

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

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