high performance computing on graphics processing units: hgpu.org

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An MPI-CUDA implementation of an improved Roe method for two-layer shallow water systems

Marc de la Asuncion, Jose M. Mantas, Manuel J. Castro, E.D. Fernandez-Nieto

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Tags: Cluster computing, CUDA, Fluid dynamics, GPU cluster, MPI, nVidia, nVidia GeForce GTX 480, Triangular meshes

November 15, 2011 by hgpu

Large Scale Plane Wave Pseudopotential Density Functional Theory Calculations on GPU Clusters

Long Wang, Weile Jia, Xuebin Chi, Yue Wu, Weiguo Gao, Lin-Wang Wang

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Tags: Algorithms, Computational chemistry, CUDA, GPU cluster, MPI, nVidia, Performance, Physics, Tesla C2050

November 14, 2011 by hgpu

Seismic Wave Propagation Simulation Using Accelerated Support Operator Rupture Dynamics on Multi-GPU

Yichen Zhou, Shenyi Song, Tingxing Dong, David A. Yuen

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Tags: CUDA, Earth and Space Sciences, Finite difference, Fortran, Geoscience, MPI, nVidia, Seismic modeling, Tesla C1060

November 14, 2011 by hgpu

Comprehensive Performance Monitoring for GPU Cluster Systems

K. Furlinger, N.J. Wright, D. Skinner

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Tags: Benchmarking, Computer science, CUDA, GPU cluster, MPI, nVidia, Performance, Tesla C2050

November 13, 2011 by hgpu

Run, Stencil, Run! – A Comparison of Modern Parallel Programming Paradigms

Helmar Burkhart, Matthias Christen, Max Rietmann, Madan Sathe, Olaf Schenk

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Tags: Benchmarking, Computer science, CUDA, MPI, nVidia, OpenMP, Tesla C2050

November 10, 2011 by hgpu

GPU Cluster with MATLAB

A. Guillen, M. Garcia, L. J. Herrera, H. Pomares, I. Rojas

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Tags: Computer science, CUDA, GPU cluster, Heterogeneous systems, MPI, Nearest neighbour, nVidia, nVidia GeForce 8400 GS, nVidia GeForce 9800 GTX, nVidia GeForce GTS 450

November 8, 2011 by hgpu

Performance analysis of a hybrid MPI/CUDA implementation of the NASLU benchmark

S.J. Pennycook, S.D. Hammond, S.A. Jarvis, G.R. Mudalige

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Tags: Benchmarking, Computer science, CUDA, MPI, nVidia, nVidia GeForce 8400 GS, nVidia GeForce 9400 GT, Operating systems, Performance, Tesla C1060, Tesla C2050, Tesla T10

November 8, 2011 by hgpu

High performance massively parallel direct N-body simulations on large GPU clusters

Peter Berczik, Keigo Nitadori, Shiyan Zhong, Rainer Spurzem, Tsuyoshi Hamada, Xiaowei Wang, Ingo Berentzen, Alexander Veles, Wei Ge

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Tags: Astrophysics, CUDA, GPU cluster, MPI, N-body simulation, nVidia, Tesla C1060, Tesla C2050

November 8, 2011 by hgpu

Transformation of Scientific Algorithms to Parallel Computing Code: Single GPU and MPI multi GPU Backends with Subdomain Support

Bjorn Meyer, Christian Plessl, Jens Forstner

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Tags: Algorithms, Code generation, CUDA, FPGA, GPU cluster, MPI, nVidia, nVidia GeForce GTX 480, Tesla C2050

November 5, 2011 by hgpu

Gyrofluid Modeling of Turbulent, Kinetic Physics

Kate Marie Despain

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Tags: CUDA, Fortran, MPI, nVidia, nVidia GeForce 9800 GTX, Package, Physics, Plasma physics

November 4, 2011 by hgpu

Scalability of Incompressible Flow Computations on Multi-GPU Clusters Using Dual-Level and Tri-Level Parallelism

Dana A. Jacobsen, Inanc Senocak

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Tags: CUDA, Fluid dynamics, GPU cluster, MPI, nVidia, OpenMP, Tesla C1060, Tesla S1070

October 25, 2011 by hgpu

The MOSIX Virtual OpenCL (VCL) Cluster Platform

Amnon Barak, Amnon Shiloh

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Tags: APU, Computer science, GPU cluster, Heterogeneous systems, MPI, nVidia, nVidia GeForce GTX 480, OpenCL, Operating systems, Package

October 24, 2011 by hgpu

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

PyOMP: Parallel programming for CPUs and GPUs with OpenMP and Python

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

Understanding GEMM Performance and Energy on NVIDIA Ada Lovelace: A Machine Learning-Based Analytical Approach

HiRep

Scaling SU(2) to 1000 GPUs using HiRep

Gaia AVU-GSR

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

gpuPairHMM: High-speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

An MPI-CUDA implementation of an improved Roe method for two-layer shallow water systems

Large Scale Plane Wave Pseudopotential Density Functional Theory Calculations on GPU Clusters

Seismic Wave Propagation Simulation Using Accelerated Support Operator Rupture Dynamics on Multi-GPU

Comprehensive Performance Monitoring for GPU Cluster Systems

Run, Stencil, Run! – A Comparison of Modern Parallel Programming Paradigms

GPU Cluster with MATLAB

Performance analysis of a hybrid MPI/CUDA implementation of the NASLU benchmark

High performance massively parallel direct N-body simulations on large GPU clusters

Transformation of Scientific Algorithms to Parallel Computing Code: Single GPU and MPI multi GPU Backends with Subdomain Support

Gyrofluid Modeling of Turbulent, Kinetic Physics

Scalability of Incompressible Flow Computations on Multi-GPU Clusters Using Dual-Level and Tri-Level Parallelism

The MOSIX Virtual OpenCL (VCL) Cluster Platform

Recent source codes

tdg-benchs: benchmarks used to test the performance of taskgraph

SW#SYCL

LLOR: Automatic Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

HiRep

Gaia AVU-GSR

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

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