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Posts

Dec, 8

High performance dense linear system solver with soft error resilience

As the scale of modern high end computing systems continues to grow rapidly, system failure has become an issue that requires a better solution than the commonly used scheme of checkpoint and restart (C/R). While hard errors have been studied extensively over the years, soft errors are still under-studied especially for modern HPC systems, and […]
Dec, 8

Three-Dimensional Modeling of Long-Wave Runup: Simulation of Tsunami Inundation with GPU-SPHysics

Tsunamis need to be studied more carefully and quantitatively to fully understand their destructive impact on coastal areas. Numerical modeling provides an accurate and useful method to model tsunami inundations on a coastline. However, models must undergo a detailed verification and validation process to be used as an accurate hazard assessment tool. Using standards and […]
Dec, 8

Graphics Processing Units for the Real-time Linear Elastostatic Simulation of Liver

Biomedical engineering solutions like surgical simulators need High Performance Computing (HPC) to achieve real-time performance. Graphics Processing Units (GPUs) offer HPC capabilities at low cost and low power consumption. In this work, it is demonstrated that a liver which is discretized by about 2500 finite element nodes, can be graphically simulated in realtime, by making […]
Dec, 8

Speeding up the evaluation phase of GP classification algorithms on GPUs

The efficiency of evolutionary algorithms has become a studied problem since it is one of the major weaknesses in these algorithms. Specifically, when these algorithms are employed for the classification task, the computational time required by them grows excessively as the problem complexity increases. This paper proposes an efficient scalable and massively parallel evaluation model […]
Dec, 8

An Algorithm for Detecting Cycles in Undirected Graphs using CUDA Technology

Cycles count in a graph is an NP-complete problem. This work minimizes the execution time to solve the problem compared to the other traditional serial, CPU based one. It reduces the hardware resources needed to a single commodity GPU. We developed an algorithm to approximate counting the number of cycles in an undirected graph, by […]
Dec, 8

Fast extraction of neuron morphologies from large-scale SBFSEM image stacks

Neuron morphology is frequently used to classify cell-types in the mammalian cortex. Apart from the shape of the soma and the axonal projections, morphological classification is largely defined by the dendrites of a neuron and their subcellular compartments, referred to as dendritic spines. The dimensions of a neuron’s dendritic compartment, including its spines, is also […]
Dec, 8

Design and Optimization of Image Processing Algorithms on Mobile GPU

The advent of GPUs with programmable shaders on mobile phones has motivated developers to utilize GPU to offload computationally intensive tasks and relive the burden of embedded CPU. In this paper, we present a set of metrics to measure characteristics of a mobile phone GPU with the focus on image processing algorithms. These measures assist […]
Dec, 8

Research on CUDA-based Kriging Interpolation Algorithm

Three-dimensional geological model can describe the types of geological information efficiently, express a variety of topological relations among geological phenomena intuitively. Kriging interpolation algorithm is an important spatial interpolation method of three-dimensional geological modeling, but every grid point needs to compute augmented matrix and solve equations, so it costs too much time. With the modeling […]
Dec, 7

Evolving Neural Networks on GPUs

Financial Time Series prediction attempts to model the behavior of financial markets using, among other things, tools like technical, intermarket, and fundamental indicators. Accurate prediction, however, is difficult for a number of reasons: financial markets are influenced, often in a non-linear, sometimes time-lagged fashion, by factors including interest and exchange rates, the rate of economic […]
Dec, 7

GPU Implementation of the Keccak Hash Function Family

Hash functions are one of the most important cryptographic primitives. Some of the currently employed hash functions like SHA-1 or MD5 are considered broken today. Therefore, in 2007 the US National Institute of Standards and Technology announced a competition for a new family of hash functions. Keccak is one of the five final candidates to […]
Dec, 7

Parallelizing AES on multicores and GPUs

The AES block cipher cryptographic algorithm is widely used and it is resource intensive. An existing sequential open source implementation of the algorithm was parallelized on multi-core microprocessors and GPUs. Performance results are presented.
Dec, 7

An Efficient Parallel Motion Estimation Algorithm and X264 Parallelization in CUDA

H.264/AVC video encoders have been widely used for its high coding efficiency. Since the computational demand proportional to the frame resolution is constantly increasing, it has been of great interest to accelerate H.264/AVC by parallel processing. Recently, graphics processing units (GPUs) have emerged as a viable target for accelerating general purpose applications by exploiting fine-grain […]

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