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MaxSSmap: A GPU program for short read mapping with the maximum scoring subsequence

Usman Roshan

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Tags: Bioinformatics, Biology, CUDA, nVidia, Short read mapping, Smith-Waterman algorithm, Tesla M2050

March 12, 2014 by hgpu

Size Matters: Space/Time Tradeoffs to Improve GPGPU Applications Performance

Abdullah Gharaibeh, Matei Ripeanu

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

February 27, 2011 by hgpu

Optimizing data intensive GPGPU computations for DNA sequence alignment

Cole Trapnell, Michael C. Schatz

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

October 30, 2010 by hgpu

GPGPU Verification of Radix Sort

Let’s sort this out: GPGPU Verification of Radix Sort

EASYPAP: a Framework for Learning Parallel Programming

EASYPAP: a Framework for Learning Parallel Programming

LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment

LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment

StarNEig: A Task-based Library for Solving Nonsymmetric Eigenvalue Problems

Task-based, GPU-accelerated and Robust Library for Solving Dense Nonsymmetric Eigenvalue Problems

FLAMEGPU: a high performance GPU extension to the FLAME framework

Working With Incremental Spatial Data During Parallel (GPU) Computation

CommAnalyzer

Automated Runtime Analysis and Adaptation for Scalable Heterogeneous Computing

elevate: implementation of the Elevate language

A Language for Describing Optimization Strategies

reproducibility of TensorFlow with ResNet

Non-Determinism in TensorFlow ResNets

SCHNAPS

Optimization of a discontinuous Galerkin solver with OpenCL and StarPU

Interoperable GPU Kernels as Latency Improver for MEC

Interoperable GPU Kernels as Latency Improver for MEC

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2020

April

27-29

Munich, Germany

8th International Workshop on OpenCL, including SYCLCon, 2019

2019

May

13-15

Boston, USA

7th International Workshop on OpenCL, 2019

2019

May

13

Boston, MA, USA

Distributed Heterogeneous Programming in C/C++ (DHPCC++), 2019

2019

May

14

Larnaca, Cyprus

3rd International Workshop on Theoretical Approaches to Performance Evaluation, Modeling and Simulation (TAPEMS), 2019

2019

July

26-28

Rome, Italy

International Conference on Frontiers of Neural Networks (ICFNN), 2019

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