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MaxSSmap: A GPU program for short read mapping with the maximum scoring subsequence

Usman Roshan

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Tags: Bioinformatics, Biology, CUDA, nVidia, Short read mapping, Smith-Waterman algorithm, Tesla M2050

March 12, 2014 by hgpu

Size Matters: Space/Time Tradeoffs to Improve GPGPU Applications Performance

Abdullah Gharaibeh, Matei Ripeanu

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

February 27, 2011 by hgpu

Optimizing data intensive GPGPU computations for DNA sequence alignment

Cole Trapnell, Michael C. Schatz

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

October 30, 2010 by hgpu

CU2CL: A prototype CUDA-to-OpenCL source-to-source translator

On the Portability of CPU-Accelerated Applications via Automated Source-to-Source Translation

GPU-based Parallel Computation Support for Stan

GPU-based Parallel Computation Support for Stan

PANNA: Properties from Artificial Neural Network Architectures

PANNA: Properties from Artificial Neural Network Architectures

Artifact Evaluation for Novel methodologies for predictable CPU-to-GPU command offloading

Novel Methodologies for Predictable CPU-To-GPU Command Offloading

tvm: Open deep learning compiler stack for cpu, gpu and specialized accelerators

A Unified Optimization Approach for CNN Model Inference on Integrated GPUs

picongpu: Particle-in-Cell Simulations for the Exascale Era

PIConGPU: Predictive Simulations of Laser-Particle Accelerators with Manycore Hardware

WCCV: Warp-coherent Condition Vectorization(on top of RV)

WCCV: Improving the Vectorization of IF-statements with Warp-Coherent Conditions

Triton: An Intermediate Language and Compiler for Tiled Neural Network Computations

Triton: An Intermediate Language and Compiler for Tiled Neural Network Computations

HEATS: Heterogeneity- and Energy-Aware Task-based Scheduling

HEATS: Heterogeneity- and Energy-Aware Task-based Scheduling

HAM: Heterogeneous Active Messages C++ library

Heterogeneous Active Messages (HAM) – Implementing Lightweight Remote Procedure Calls in C++

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2019

May

13-15

Boston, USA

7th International Workshop on OpenCL, 2019

2019

May

13

Boston, MA, USA

Distributed Heterogeneous Programming in C/C++ (DHPCC++), 2019

2019

May

14

Larnaca, Cyprus

3rd International Workshop on Theoretical Approaches to Performance Evaluation, Modeling and Simulation (TAPEMS), 2019

2019

July

26-28

Rome, Italy

International Conference on Frontiers of Neural Networks (ICFNN), 2019

2019

July

26-28

Rome, Italy

International Conference on Frontiers of Artificial Intelligence and Machine Learning (FAIML), 2019

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