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N-body Simulation for Astronomical Collisional Systems with a New SIMD Instruction Set Extension to the x86 Architecture, Advanced Vector Extensions

Ataru Tanikawa, Kohji Yoshikawa, Takashi Okamoto, Keigo Nitadori

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Tags: Algorithms, Astrophysics, Instrumentation and Methods for Astrophysics, N-body simulation, Stellar dynamics

April 15, 2011 by hgpu

OpenCL/OpenGL aproach for studying active Brownian motion

Michal A. Zabicki

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Tags: Biological Physics, Computational Physics, nVidia, nVidia GeForce 9400 M, nVidia GeForce 9800 GT, OpenCL, OpenGL, Physics

April 14, 2011 by hgpu

GPU-computing in econophysics and statistical physics

T. Preis

Tags: Computer science, CUDA, Finance, Ising model, nVidia, Physics

April 11, 2011 by hgpu

Data-parallel algorithms for large-scale real-time simulation of the cellular potts model on graphics processing units

Jose Juan Tapia, Roshan D'Souza

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Tags: Biophysics, CUDA, Data Structures and Algorithms, nVidia, nVidia GeForce GTX 280, OpenGL, Physics, Programming techniques

April 9, 2011 by hgpu

A Comparative Study on ASIC, FPGAs, GPUs and General Purpose Processors in the O(N^2) Gravitational N-body Simulation

Tsuyoshi Hamada, Khaled Benkrid, Keigo Nitadori, Makoto Taiji

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Tags: Astrophysics, Cosmology, FPGA, N-body simulation, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce 9800 GX2, Physics

April 8, 2011 by hgpu

ARKCoS: Artifact-Suppressed Accelerated Radial Kernel Convolution on the Sphere

Franz Elsner, Benjamin D. Wandelt

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Tags: Astrophysics, CUDA, Image processing, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 480, Physics

April 7, 2011 by hgpu

Scaling Hierarchical N-body Simulations on GPU Clusters

Pritish Jetley, Lukasz Wesolowski, Filippo Gioachin, Laxmikant V. Kale, Thomas R. Quinn

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Tags: Astrophysics, Cosmology, CUDA, GPU cluster, N-body simulation, nVidia, nVidia GeForce 8800 GTS, Physics, Tesla S1070

April 7, 2011 by hgpu

Parallelizing Simulated Annealing-Based Placement Using GPGPU

Alexander Choong, Rami Beidas, Jianwen Zhu

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Tags: Numerical simulation, nVidia, nVidia GeForce GTX 280, Physics

April 5, 2011 by hgpu

Multi-mass solvers for lattice QCD on GPUs

A. Alexandru, C. Pelissier, B. Gamari, F. Lee

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Tags: CUDA, High Energy Physics - Lattice, Monte Carlo simulation, nVidia, nVidia GeForce GTX 480, Physics, QCD

March 29, 2011 by hgpu

Data Assimilation using a GPU Accelerated Path Integral Monte Carlo Approach

John C. Quinn, Henry D. I. Abarbanel

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Tags: Computational Physics, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 460, Physics, Probability, Statistics

March 28, 2011 by hgpu

Study on Transient Temperature Field Parallel Computing in Cooling Control Based on a GPU Fourier Method

Liang Wang, Yi-sheng Zhang

Tags: CUDA, nVidia, Physics, Thermodynamics

March 27, 2011 by hgpu

Using GPUs for beamforming acceleration on SAFT imaging

D. Romero, O. Martinez-Graullera, C.J. Martin, R.T. Higuti, A. Octavio

Tags: Filtering, Image reconstruction, Physics, Signal processing, Ultrasound

March 24, 2011 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

N-body Simulation for Astronomical Collisional Systems with a New SIMD Instruction Set Extension to the x86 Architecture, Advanced Vector Extensions

OpenCL/OpenGL aproach for studying active Brownian motion

GPU-computing in econophysics and statistical physics

Data-parallel algorithms for large-scale real-time simulation of the cellular potts model on graphics processing units

A Comparative Study on ASIC, FPGAs, GPUs and General Purpose Processors in the O(N^2) Gravitational N-body Simulation

ARKCoS: Artifact-Suppressed Accelerated Radial Kernel Convolution on the Sphere

Scaling Hierarchical N-body Simulations on GPU Clusters

Parallelizing Simulated Annealing-Based Placement Using GPGPU

Multi-mass solvers for lattice QCD on GPUs

Data Assimilation using a GPU Accelerated Path Integral Monte Carlo Approach

Study on Transient Temperature Field Parallel Computing in Cooling Control Based on a GPU Fourier Method

Using GPUs for beamforming acceleration on SAFT imaging

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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