high performance computing on graphics processing units: hgpu.org

Applications

hgpu.org » Applications » Physics

General-purpose molecular dynamics simulations on GPU-based clusters

Christian R. Trott, Lars Winterfeld, Paul S. Crozier

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Tags: Computational Physics, Condensed matter, CUDA, GPU cluster, Materials Science, Molecular dynamics, MPI, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 295, Package, Performance, Physics, Tesla C1060, Tesla S1070

March 8, 2011 by hgpu

Application-guided tool development for architecturally diverse computation

Roger D. Chamberlain, Jeremy Buhler, Mark A. Franklin, James H. Buckley

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Tags: Algorithms, Astrophysics, Biology, Computer science, CUDA, Finance, FPGA, Heterogeneous systems, Monte Carlo simulation, nVidia, nVidia GeForce GTX 260, Search, Security

March 7, 2011 by hgpu

Statistical constraints on binary black hole inspiral dynamics

Chad R. Galley, Frank Herrmann, John Silberholz, Manuel Tiglio, Gustavo Guerberoff

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Tags: CUDA, General Relativity and Quantum Cosmology, GPU cluster, nVidia, Physics

March 6, 2011 by hgpu

Building Correlators with Many-Core Hardware

Rob V. van Nieuwpoort and John W. Romein

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Tags: Astrophysics, ATI, ATI CAL, ATI IL, ATI Radeon HD 4870, ATI Stream, Cell processor, CUDA, nVidia, Physics, Signal processing, Tesla C1060

March 3, 2011 by hgpu

UCHPC – UnConventional High Performance Computing for Finite Element Simulations

Stefan Turek, Dominik Goddeke, Christian Becker, Sven H.M. Buijssen, Hilmar Wobker

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Tags: Finite element method, Heterogeneous systems, MPI, nVidia, nVidia Quadro FX 5600, Physics

March 1, 2011 by hgpu

Co-processor acceleration of an unmodified parallel solid mechanics code with FEASTGPU

Dominik Goddeke, Hilmar Wobker, Robert Strzodka, Jamaludin Mohd-Yusof, Patrick McCormick, Stefan Turek

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Tags: CUDA, Finite element method, Heterogeneous systems, MPI, nVidia, nVidia Quadro FX 5600, Physics

March 1, 2011 by hgpu

A Case Study for Petascale Applications in Astrophysics: Simulating Gamma-Ray Bursts

C. D. Ott, E. Schnetter, G. Allen, E. Seidel, J. Tao, B. Zink

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, nVidia, nVidia Quadro FX 5600

February 28, 2011 by hgpu

A general relativistic evolution code on CUDA architectures

Burkhard Zink

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Tags: Astrophysics, CUDA, Finite difference, Instrumentation and Methods for Astrophysics, nVidia, nVidia Quadro FX 5600

February 28, 2011 by hgpu

Scientific Visualization in Astronomy: Towards the Petascale Astronomy Era

Amr Hassan, Christopher J. Fluke

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Tags: Astrophysics, Instrumentation and Methods for Astrophysics, Review, Visualization

February 28, 2011 by hgpu

Fast and Memory Efficient GPU-Based Rendering of Tensor Data

Mario Hlawitschka, Sebastian Eichelbaum, Gerik Scheuermann

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Tags: Computer science, OpenGL, Physics, Rendering, Visualization

February 27, 2011 by hgpu

Data Mining and Machine Learning in Astronomy

Nicholas M. Ball, Robert J. Brunner

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Tags: Astrophysics, Cosmology and Extragalactic Astrophysics, CUDA, Data mining, Instrumentation and Methods for Astrophysics, nVidia, Review

February 27, 2011 by hgpu

SU(2) Lattice Gauge Theory Simulations on Fermi GPUs

Nuno Cardoso, Pedro Bicudo

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, Monte Carlo simulation, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 480, Package, Physics

February 25, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Applications

General-purpose molecular dynamics simulations on GPU-based clusters

Application-guided tool development for architecturally diverse computation

Statistical constraints on binary black hole inspiral dynamics

Building Correlators with Many-Core Hardware

UCHPC – UnConventional High Performance Computing for Finite Element Simulations

Co-processor acceleration of an unmodified parallel solid mechanics code with FEASTGPU

A Case Study for Petascale Applications in Astrophysics: Simulating Gamma-Ray Bursts

A general relativistic evolution code on CUDA architectures

Scientific Visualization in Astronomy: Towards the Petascale Astronomy Era

Fast and Memory Efficient GPU-Based Rendering of Tensor Data

Data Mining and Machine Learning in Astronomy

SU(2) Lattice Gauge Theory Simulations on Fermi GPUs

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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