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Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors

Dragan Bosnacki, Maximilian R Odenbrett, Anton Wijs, Willem Ligtenberg, Peter Hilbers

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 480, Package

November 23, 2012 by hgpu

GPU Implementation of Fuzzy Anisotropic Diffusion

Roberto de Jesus Duarte Coello, Felipe de Jesus Solis Lugo, Alejandro Castillo Atoche, Jaime Ortegon Aguilar

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Tags: Algorithms, CUDA, Image processing, nVidia, Tesla C2075

November 22, 2012 by hgpu

CoreTSAR: Task Scheduling for Accelerator-aware Runtimes

Thomas R. W. Scogland, Wu-chun Feng, Barry Rountree, Bronis R. de Supinski

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, Task scheduling, Tesla C2070

November 22, 2012 by hgpu

Automatic generation of software pipelines for heterogeneous parallel systems

Jacques A. Pienaar, Srimat Chakradhar, Anand Raghunathan

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, Tesla C1060

November 22, 2012 by hgpu

Tera-scale Astronomical Data Analysis and Visualization

A. H. Hassan, C. J. Fluke, D. G. Barnes, V. A. Kilborn

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Tags: Algorithms, Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, nVidia, Rendering, Tesla C2070, Tesla C2090, Visualization

November 22, 2012 by hgpu

List Mode PET reconstruction

Balazs Kovacs

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Tags: Computer science, CUDA, nVidia, PET, Tesla C2050

November 22, 2012 by hgpu

Early evaluation of directive-based GPU programming models for productive exascale computing

Seyong Lee, Jeffrey S. Vetter

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Tags: Computer science, CUDA, nVidia, OpenACC, Tesla M2090

November 21, 2012 by hgpu

High-Performance General Solver for Extremely Large-Scale Semidefinite Programming Problems

Katsuki Fujisawa, Hitoshi Sato, Satoshi Matsuoka, Toshio Endo, Makoto Yamashita, Maho Nakata

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Tags: Algorithms, Computer science, CUDA, Factorization, nVidia, Optimization, Tesla M2050

November 21, 2012 by hgpu

ValuePack: value-based scheduling framework for CPU-GPU clusters

Vignesh T. Ravi, Michela Becchi, Gagan Agrawal, Srimat Chakradhar

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Tags: Cloud, Computer science, CUDA, GPU cluster, Heterogeneous systems, nVidia, Tesla C2050

November 21, 2012 by hgpu

An Adaptive Multiresolution Mesh Representation for CPU-GPU Coupled Computation

Andre Maximo, Luiz Velho, Marcelo Siqueira

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Tags: 3D Graphics and Realism, Computer science, nVidia, nVidia GeForce GTX 560 Ti, OpenGL, Visualization

November 21, 2012 by hgpu

Pattern Recognition with OpenCL Heterogeneous Platform

Jordan Vrtanoski, Toni Draganov Stojanovski

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Tags: Algorithms, ATI, ATI Radeon HD 5870, Computer science, Heterogeneous systems, Neural networks, OpenCL, Pattern recognition

November 21, 2012 by hgpu

Dataflow-driven GPU performance projection for multi-kernel transformations

Jiayuan Meng, Vitali A. Morozov, Venkatram Vishwanath, Kalyan Kumaran

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Tags: Computer science, CUDA, nVidia, nVidia Quadro FX 5600, Performance, Tesla C1060

November 20, 2012 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors

GPU Implementation of Fuzzy Anisotropic Diffusion

CoreTSAR: Task Scheduling for Accelerator-aware Runtimes

Automatic generation of software pipelines for heterogeneous parallel systems

Tera-scale Astronomical Data Analysis and Visualization

List Mode PET reconstruction

Early evaluation of directive-based GPU programming models for productive exascale computing

High-Performance General Solver for Extremely Large-Scale Semidefinite Programming Problems

An Adaptive Multiresolution Mesh Representation for CPU-GPU Coupled Computation

Pattern Recognition with OpenCL Heterogeneous Platform

Dataflow-driven GPU performance projection for multi-kernel transformations

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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