high performance computing on graphics processing units: hgpu.org

Applications

How GPUs Can Improve the Quality of Magnetic Resonance Imaging

Sam S. Stone, Haoran Yi, Justin P. Haldar, Wen-mei W. Hwu, Bradley P. Sutton, and Zhi-Pei Liang

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Tags: CUDA, FFT, Image processing, Image reconstruction, Magnetic resonance imaging, Medicine, MRI, nVidia, nVidia GeForce 8800 GTX

February 20, 2011 by hgpu

GPU-based Multi-Volume Rendering of Complex Data in Neuroscience and Neurosurgery

Johanna Beyer

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Tags: Computed tomography, Computer science, CT, CUDA, Medicine, Neuroscience, nVidia, nVidia GeForce GTX 280, Rendering, Visualization

February 13, 2011 by hgpu

GPU-based fast pencil beam algorithm for proton therapy

Rintaro Fujimoto, Tsuneya Kurihara, Yoshihiko Nagamine

Tags: Medical Physics, Medicine, nVidia, nVidia GeForce GTX 480, Proton radiotherapy

February 11, 2011 by hgpu

3D tumor localization through real-time volumetric x-ray imaging for lung cancer radiotherapy

Ruijiang Li, John H. Lewis, Xun Jia, Xuejun Gu, Michael Folkerts, Chunhua Men, William Y. Song, Steve B. Jiang

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Tags: CUDA, Image reconstruction, Medical Physics, Medicine, nVidia, Physics, Radiotherapy, Tesla C1060

February 9, 2011 by hgpu

Real-Time Simulation and Visualization of Subject-Specific 3D Lung Dynamics

Anand P. Santhanam, Cali M. Fidopiastis, Paul Davenport, Katja Langen, Sanford Meeks, Jannick P. Rolland

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Tags: Cg, Medicine, nVidia, nVidia GeForce 4, Physics-based simulation, Virtual reality

February 8, 2011 by hgpu

Real-Time Prediction of Brain Shift Using Nonlinear Finite Element Algorithms

Grand Roman Joldes, Adam Wittek, Mathieu Couton, Simon K. Warfield and Karol Miller

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Tags: CUDA, Finite element method, Image processing, Image registration, Medicine, MRI, nVidia

February 5, 2011 by hgpu

3D Registration Based on Normalized Mutual Information: Performance of CPU vs. GPU Implementation

Florian Jung, Stefan Wesarg

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Tags: CUDA, Image processing, Image registration, Medicine, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 285

February 3, 2011 by hgpu

Evaluating the Performance of Processing Medical Volume Data on Graphics Hardware

Matthias Raspe, Guido Lorenz and Stefan Muller

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Tags: Computed tomography, CT, Image processing, Medicine, MRI, nVidia, nVidia GeForce 8800 GTS

January 27, 2011 by hgpu

Accelerating iterative field-compensated MR image reconstruction on GPUs

Yue Zhuo, Xiao-Long Wu, Justin P. Haldar, Wen-mei Hwu, Zhi-pei Liang, Bradley P. Sutton

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Tags: Conjugate gradient solver, CUDA, Image processing, Image reconstruction, Medicine, MRI, nVidia, nVidia GeForce GTX 280

January 24, 2011 by hgpu

Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture

Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chrisochoides

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Tags: Bioinformatics, CUDA, Image registration, Medicine, nVidia, nVidia GeForce 8800 GT

January 17, 2011 by hgpu

Interactive visual analysis of contrast-enhanced ultrasound data based on local neighborhood statistics

Paolo Angelelli, Kim Nylund, Odd Helge Gilja, Helwig Hauser

Tags: Medicine, OpenCL, Ultrasound, Visualization

January 16, 2011 by hgpu

Random Walks for Interactive Organ Segmentation in Two and Three Dimensions: Implementation and Validation

Leo Grady, Thomas Schiwietz, Shmuel Aharon, Rudiger Westermann

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Tags: ATI, ATI Radeon X800 XT, Computer science, Image processing, Medicine

January 15, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

How GPUs Can Improve the Quality of Magnetic Resonance Imaging

GPU-based Multi-Volume Rendering of Complex Data in Neuroscience and Neurosurgery

GPU-based fast pencil beam algorithm for proton therapy

3D tumor localization through real-time volumetric x-ray imaging for lung cancer radiotherapy

Real-Time Simulation and Visualization of Subject-Specific 3D Lung Dynamics

Real-Time Prediction of Brain Shift Using Nonlinear Finite Element Algorithms

3D Registration Based on Normalized Mutual Information: Performance of CPU vs. GPU Implementation

Evaluating the Performance of Processing Medical Volume Data on Graphics Hardware

Accelerating iterative field-compensated MR image reconstruction on GPUs

Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture

Interactive visual analysis of contrast-enhanced ultrasound data based on local neighborhood statistics

Random Walks for Interactive Organ Segmentation in Two and Three Dimensions: Implementation and Validation

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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