high performance computing on graphics processing units: hgpu.org

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Utilizing GPGPU in Computer Emulation

Peter Jakubco, Slavomir Simonak

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Tags: ATI, ATI Radeon HD 6570, Computer science, OpenCL, Package

July 8, 2012 by hgpu

Random Walks for Image Cosegmentation

Maxwell D. Collins, Jia Xu, Leo Grady, Vikas Singh

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Tags: Algorithms, CUDA, Image processing, nVidia, nVidia GeForce GTX 470, Package

July 7, 2012 by hgpu

Automatic Optimization of In-Flight Memory Transactions for GPU Accelerators based on a Domain-Specific Language for Medical Imaging

Richard Membarth, Frank Hannig, Jurgen Teich, Mario Korner, Wieland Eckert

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Tags: Code generation, CUDA, Image processing, nVidia, OpenCL, Optimization, Package, Tesla C2050

July 3, 2012 by hgpu

Acceleration of bilateral filtering algorithm for manycore and multicore architectures

Dinesh Agarwal, Sami Wilf, Abinashi Dhungel, Sushil K. Prasad

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Tags: Algorithms, Computer science, CUDA, Filtering, nVidia, nVidia GeForce GTX 280, Optimization, Package

July 2, 2012 by hgpu

Accelerating large-scale protein structure alignments with graphics processing units

Bin Pang, Nan Zhao, Michela Becchi, Dmitry Korkin, Chi-Ren Shyu

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Tags: Bioinformatics, Biology, CUDA, Java, nVidia, Package, Tesla C2050

June 30, 2012 by hgpu

An Optimized Large-Scale Hybrid DGEMM Design for CPUs and ATI GPUs

Jiajia Li, Xingjian Li, Guangming Tan, Mingyu Chen, Ninghui Sun

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Tags: Algorithms, ATI, ATI CAL, ATI Radeon HD 5970, ATI Stream, Computer science, Heterogeneous systems, Matrix multiplication, Optimization, Package

June 29, 2012 by hgpu

Multi-GPU Island-Based Genetic Algorithm for Solving the Knapsack Problem

Jiri Jaros

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Tags: Algorithms, Computer science, CUDA, Genetic programming, GPU cluster, MPI, nVidia, nVidia GeForce GTX 580, Package

June 26, 2012 by hgpu

CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows-Wheeler transform

Yongchao Liu, Bertil Schmidt, Douglas L. Maskell

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Tesla C2050

June 21, 2012 by hgpu

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

Rio Yokota, L. A. Barba

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Tags: Computational Physics, Computer science, CUDA, Fast multipole method, FFT, Fluid dynamics, N-body simulation, Numerical Analysis, Numerical simulation, nVidia, Package, Spectral methods, Tesla C2070, Tesla M2050

June 21, 2012 by hgpu

Towards a GPU-based Implementation of Interaction Nets

Eugen Jiresch

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Tags: Computer science, CUDA, Graph theory, nVidia, nVidia GeForce GTX 460, Package

June 20, 2012 by hgpu

GPU Computing: Image Convolution

Jan Novak, Anton Kaplanyan, Gabor Liktor, Carsten Dachsbacher

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Tags: Education, Image processing, OpenCL, Package

June 20, 2012 by hgpu

Gdev: First-Class GPU Resource Management in the Operating System

Shinpei Kato, Michael McThrow, Carlos Maltzahn, Scott Brandt

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, Operating systems, Package

June 18, 2012 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Packages

Utilizing GPGPU in Computer Emulation

Random Walks for Image Cosegmentation

Automatic Optimization of In-Flight Memory Transactions for GPU Accelerators based on a Domain-Specific Language for Medical Imaging

Acceleration of bilateral filtering algorithm for manycore and multicore architectures

Accelerating large-scale protein structure alignments with graphics processing units

An Optimized Large-Scale Hybrid DGEMM Design for CPUs and ATI GPUs

Multi-GPU Island-Based Genetic Algorithm for Solving the Knapsack Problem

CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows-Wheeler transform

FMM-based vortex method for simulation of isotropic turbulence on GPUs, compared with a spectral method

Towards a GPU-based Implementation of Interaction Nets

GPU Computing: Image Convolution

Gdev: First-Class GPU Resource Management in the Operating System

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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