high performance computing on graphics processing units: hgpu.org

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Accelerated protein structure comparison using TM-score-GPU

Ling-Hong Hung, Ram Samudrala

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Tags: ATI, ATI Radeon HD 5870, Bioinformatics, Biology, Clustering, OpenCL, Package

October 5, 2012 by hgpu

KERNELGEN – A Toolchain for Automatic GPU-centric Applications Porting

Dmitry Mikushin, Nicolas Likhogrud

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Tags: Computer science, CUDA, nVidia, OpenCL, Package, Portability, Tesla C2050

October 3, 2012 by hgpu

Charged particles constrained to a curved surface

Thomas Muller, Jorg Frauendiener

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Tags: CUDA, Electrostatics, nVidia, OpenGL, Package, Physics

September 20, 2012 by hgpu

Simulating spiking neural networks on GPU

Romain Brett

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Tags: Computer science, CUDA, Neural networks, nVidia, nVidia GeForce GTX 580, Package, Python, Review

September 19, 2012 by hgpu

Beauty And The Beast: Exploiting GPUs In Haskell

Alex Cole, Alistair McEwan, Geoffrey Mainland

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Tags: Computer science, CUDA, Haskell, nVidia, nVidia GeForce GTX 460, Package

September 19, 2012 by hgpu

Massive parallelization of combinatorial statistical genetics analyses porting machine learning methods on general purpose graphics processing units (GPU)

Tony Kam-Thong

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Tags: Biology, CUDA, Genetics, Machine learning, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 580, Package, Thesis

September 16, 2012 by hgpu

Parallelize L-BFGS-B on the GPU

Yun Fei, Wenping Wang, Bin Wang

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Tags: Algorithms, Computer science, CUDA, Nonlinear optimization, nVidia, nVidia GeForce GTX 580, Package, Tessellation, Voronoi diagram

September 14, 2012 by hgpu

Dynamical heterogeneities as fingerprints of a backbone structure in Potts models

Ezequiel E. Ferrero, Federico Roma, Sebastian Bustingorry, Pablo M. Gleiser

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Tags: Condensed matter, CUDA, Monte Carlo simulation, Numerical simulation, nVidia, nVidia GeForce GTX 480, Package, Physics, Statistical Mechanics

September 12, 2012 by hgpu

A First Step Towards GPU-assisted Query Optimization

Max Heimel, Volker Markl

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Tags: Computer science, Databases, nVidia, nVidia GeForce GTX 460, OpenCL, Optimization, Package

September 11, 2012 by hgpu

GPU accelerated QTL detection

G. Chapuis, O. Filangi, J.M. Elsen, D. Lavenier, P. Le Roy

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, Package, Tesla C2050

September 11, 2012 by hgpu

CuNeuQuant: A CUDA Implementation of the NeuQuant Image Quantization Algorithm

David Bottisti, Liuva Mendez, Damian Dechev

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Tags: Algorithms, Computer vision, CUDA, Image processing, Neural networks, nVidia, nVidia GeForce 9800 GTX, Package

September 10, 2012 by hgpu

Mastering Software Variant Explosion for GPU Accelerators

Richard Membarth, Frank Hannig, Jurgen Teich, Mario Korner, Wieland Eckert

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Tags: ATI, ATI Radeon HD 5870, ATI Radeon HD 6970, Computer science, CUDA, Heterogeneous systems, Image processing, nVidia, nVidia Quadro FX 5800, OpenCL, Package, Tesla C2050

September 8, 2012 by hgpu

GEAK-agent: LLM-based AI agent, which can write correct and efficient GPU kernels automatically

Geak: Introducing Triton Kernel AI Agent & Evaluation Benchmarks

OpenDwarfs 2025: re-engineered version of the OpenDwarfs benchmark suite, for compatibility with modern platforms

OpenDwarfs 2025: Modernizing the OpenDwarfs Benchmark Suite for Heterogeneous Computing

Specx: Speculative task-based runtime system

Specx: a C++ task-based runtime system for heterogeneous distributed architectures

Mutual-Supervised Learning for Sequential-to-Parallel Code Translation

Hardware Compute Partitioning on NVIDIA GPUs for Composable Systems

KISim: Kubernetes Intelligent Scheduling Simulator

KIS-S: A GPU-Aware Kubernetes Inference Simulator with RL-Based Auto-Scaling

Efficient GPU Implementation of Multi-Precision Integer Division

exa-AMD: Exascale Accelerated Materials Discovery

Accelerated discovery and design of Fe-Co-Zr magnets with tunable magnetic anisotropy through machine learning and parallel computing

ParEval: A Parallel Code Evaluation Benchmark

ParEval-Repo: A Benchmark Suite for Evaluating LLMs with Repository-level HPC Translation Tasks

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

Libra: Synergizing CUDA and Tensor Cores for High-Performance Sparse Matrix Multiplication

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high performance computing on graphics processing units: hgpu.org

Packages

Accelerated protein structure comparison using TM-score-GPU

KERNELGEN – A Toolchain for Automatic GPU-centric Applications Porting

Charged particles constrained to a curved surface

Simulating spiking neural networks on GPU

Beauty And The Beast: Exploiting GPUs In Haskell

Massive parallelization of combinatorial statistical genetics analyses porting machine learning methods on general purpose graphics processing units (GPU)

Parallelize L-BFGS-B on the GPU

Dynamical heterogeneities as fingerprints of a backbone structure in Potts models

A First Step Towards GPU-assisted Query Optimization

GPU accelerated QTL detection

CuNeuQuant: A CUDA Implementation of the NeuQuant Image Quantization Algorithm

Mastering Software Variant Explosion for GPU Accelerators

Recent source codes

GEAK-agent: LLM-based AI agent, which can write correct and efficient GPU kernels automatically

OpenDwarfs 2025: re-engineered version of the OpenDwarfs benchmark suite, for compatibility with modern platforms

Specx: Speculative task-based runtime system

Mutual-Supervised Learning for Sequential-to-Parallel Code Translation

Hardware Compute Partitioning on NVIDIA GPUs for Composable Systems

KISim: Kubernetes Intelligent Scheduling Simulator

Efficient GPU Implementation of Multi-Precision Integer Division

exa-AMD: Exascale Accelerated Materials Discovery

ParEval: A Parallel Code Evaluation Benchmark

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

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