high performance computing on graphics processing units: hgpu.org

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A scalable hybrid algorithm based on domain decomposition and algebraic multigrid for solving partial differential equations on a cluster of CPU/GPUs

Li Luo, Chao Yang, Yubo Zhao, Xiao-Chuan Cai

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Tags: Algorithms, Computer science, CUDA, Differential equations, Factorization, FFT, Finite difference, GPU cluster, nVidia, Partial differential equations, PDEs, Tesla C1060

October 30, 2011 by hgpu

Efficient Implementation of the eta_T Pairing on GPU

Yosuke Katoh, Yun-Ju Huang, Chen-Mou Cheng, Tsuyoshi Takagi

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Tags: Algorithms, Computer science, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Security, Tesla C1060, Tesla C2050

October 30, 2011 by hgpu

Optimizing and Auto-tuning Belief Propagation on the GPU

Scott Grauer-Gray, John Cavazos

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Tags: Compilers, Computer science, CUDA, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 470, Optimization, Tesla C870

October 30, 2011 by hgpu

Effective Parallelization of Non-bonded Interactions Kernel for Virtual Screening on GPUs

Gines D. Guerrero, Horacio Perez-Sanchez, Wolfgang Wenzel, Jose M. Cecilia, Jose M. Garcia

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Tags: Bioinformatics, Biology, CUDA, nVidia, Optimization, Pharmaceuticals, Tesla C1060

October 30, 2011 by hgpu

Intermediate Language Extensions for Parallelism

Jisheng Zhao, Vivek Sarkar

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Tags: Computer science, Java, Optimization, Programming techniques

October 30, 2011 by hgpu

High-Level Synthesis for FPGAs: From Prototyping to Deployment

Jason Cong, Bin Liu, Stephen Neuendorffer, Juanjo Noguera, Kees Vissers, Zhiru Zhang

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Tags: Algorithms, Computer science, FPGA

October 30, 2011 by hgpu

Exploring Many-Core Design Templates for FPGAs and ASICs

Ilia Lebedev, Christopher Fletcher, Shaoyi Cheng, James Martin, Austin Doupnik, Daniel Burke, Mingjie Lin, John Wawrzynek

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Tags: ASIC, Bayesian, Computer science, FPGA, nVidia, nVidia GeForce GTX 580, OpenCL, Performance

October 30, 2011 by hgpu

Improving Energy Efficiency of GPU based General-Purpose Scientific Computing through Automated Selection of Near Optimal Configurations

Xiaohan Ma, Marion Rincon, Zhigang Deng

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Energy-efficient computing, nVidia, nVidia GeForce 8800 GT

October 30, 2011 by hgpu

Leveraging Binary Translation for Heterogeneous Profiling

Dan Upton, Kim Hazelwood

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Tags: ATI, ATI Radeon HD 5870, Computer science, Heterogeneous systems, nVidia, OpenCL, Performance, Tesla C2050

October 30, 2011 by hgpu

GPU Computations in Heterogeneous Grid Environments

Marcus Hinders

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Tags: ATI, ATI Radeon HD 5870, Biology, Computational biology, Computer science, Grid, Heterogeneous systems, nVidia, nVidia GeForce 8600 GT, nVidia GeForce GTX 280, OpenCL, Thesis

October 30, 2011 by hgpu

Dynamic Scheduling of Parallel Code for Heterogeneous Systems

Jeff Brantley, Chris Gregg

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Tags: ATI, ATI Radeon HD 4350, Computer science, Heterogeneous systems, OpenCL, Performance

October 30, 2011 by hgpu

Development and evaluation of a GPU-optimized N-body term for the simulation of biomolecules

Timo Strunk, Moritz Wolf, Wolfgang Wenzel

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Tags: ATI, ATI Radeon HD 5870, Benchmarking, Biology, Biomolecules, Monte Carlo simulation, N-body simulation, nVidia, nVidia GeForce GTX 285, OpenCL, Optimization

October 30, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

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high performance computing on graphics processing units: hgpu.org

Applications

A scalable hybrid algorithm based on domain decomposition and algebraic multigrid for solving partial differential equations on a cluster of CPU/GPUs

Efficient Implementation of the eta_T Pairing on GPU

Optimizing and Auto-tuning Belief Propagation on the GPU

Effective Parallelization of Non-bonded Interactions Kernel for Virtual Screening on GPUs

Intermediate Language Extensions for Parallelism

High-Level Synthesis for FPGAs: From Prototyping to Deployment

Exploring Many-Core Design Templates for FPGAs and ASICs

Improving Energy Efficiency of GPU based General-Purpose Scientific Computing through Automated Selection of Near Optimal Configurations

Leveraging Binary Translation for Heterogeneous Profiling

GPU Computations in Heterogeneous Grid Environments

Dynamic Scheduling of Parallel Code for Heterogeneous Systems

Development and evaluation of a GPU-optimized N-body term for the simulation of biomolecules

Recent source codes

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MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

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