high performance computing on graphics processing units: hgpu.org

Applications

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CULA: hybrid GPU accelerated linear algebra routines

John R. Humphrey, Daniel K. Price, Kyle E. Spagnoli, Aaron L. Paolini, Eric J. Kelmelis

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Tags: Computer science, CUDA, CULA, Linear Algebra, nVidia, Package, Tesla C1060

April 11, 2011 by hgpu

Clustering coefficient queries on massive dynamic social networks

Zhiyu Liu, Chen Wang, Qiong Zou, Huayong Wang

Tags: Algorithms, Computer science, Databases, Networks

April 11, 2011 by hgpu

A GPU-based implementation of the MRF algorithm in ITK package

Pedro Valero, Jose Sanchez, Diego Cazorla, Enrique Arias

Tags: Magnetic resonance imaging, Medicine, MRI

April 11, 2011 by hgpu

GPU-computing in econophysics and statistical physics

T. Preis

Tags: Computer science, CUDA, Finance, Ising model, nVidia, Physics

April 11, 2011 by hgpu

Exact and complete short read alignment to microbial genomes using GPU programming

Jochen Blom, Tobias Jakobi, Daniel Doppmeier, Sebastian Jaenicke, Jorn Kalinowski, Jens Stoye, Alexander Goesmann

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Tags: Bioinformatics, Biology, CUDA, Next-Generation sequencing, nVidia, nVidia GeForce GTX 280, Package

April 11, 2011 by hgpu

DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

Yongchao Liu, Bertil Schmidt, Douglas Maskell

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Tags: Bioinformatics, Biology, CUDA, MPI, Next-Generation sequencing, nVidia, OpenMP, Package, Tesla S1070

April 11, 2011 by hgpu

Simulation of bevel gear cutting with GPGPUs-performance and productivity

Sandra Wienke, Dmytro Plotnikov, Dieter an Mey, Christian Bischof, Ario Hardjosuwito, Christof Gorgels, Christian Brecher

Tags: Computational Engineering, Computer science, CUDA, nVidia, OpenCL, OpenMP

April 11, 2011 by hgpu

GPU Accelerated Adams-Bashforth Multirate Discontinuous Galerkin FEM Simulation of High-Frequency Electromagnetic Fields

Nico Godel, Steffen Schomann, Tim Warburton, Markus Clemens

Tags: CUDA, Electrodynamics, Electromagnetics simulation, FEM, Finite element method, nVidia

April 10, 2011 by hgpu

GPU acceleration of the dynamics routine in the HIRLAM weather forecast model

Van Thieu Vu, Gerard Cats, Lex Wolters

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Tags: CUDA, Earth and Space Sciences, nVidia, nVidia GeForce 9800 GX2, Weather Prediction Model

April 10, 2011 by hgpu

Power-Efficient Work Distribution Method for CPU-GPU Heterogeneous System

Guibin Wang, Xiaoguang Ren

Tags: Computer science, Energy-efficient computing, Heterogeneous systems

April 10, 2011 by hgpu

Real-time stereo matching: A cross-based local approach

Jiangbo Lu, Ke Zhang, Gauthier Lafruit, Francky Catthoor

Tags: Algorithms, Image processing, Real-time graphics

April 10, 2011 by hgpu

Accelerating global sequence alignment using CUDA compatible multi-core GPU

T.R.P. Siriwardena, D.N. Ranasinghe

Tags: Bioinformatics, Biology, CUDA, nVidia, Sequence alignment

April 10, 2011 by hgpu

Code examples for paper on SYCL backend of Kokkos - IWOCL 2024

Experiences with implementing Kokkos’ SYCL backend

ROCm's implementation of Gromacs

GROMACS on AMD GPU-Based HPC Platforms: Using SYCL for Performance and Portability

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

CULA: hybrid GPU accelerated linear algebra routines

Clustering coefficient queries on massive dynamic social networks

A GPU-based implementation of the MRF algorithm in ITK package

GPU-computing in econophysics and statistical physics

Exact and complete short read alignment to microbial genomes using GPU programming

DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

Simulation of bevel gear cutting with GPGPUs-performance and productivity

GPU Accelerated Adams-Bashforth Multirate Discontinuous Galerkin FEM Simulation of High-Frequency Electromagnetic Fields

GPU acceleration of the dynamics routine in the HIRLAM weather forecast model

Power-Efficient Work Distribution Method for CPU-GPU Heterogeneous System

Real-time stereo matching: A cross-based local approach

Accelerating global sequence alignment using CUDA compatible multi-core GPU

Recent source codes

Code examples for paper on SYCL backend of Kokkos - IWOCL 2024

ROCm's implementation of Gromacs

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

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