high performance computing on graphics processing units: hgpu.org

Programming

hgpu.org » Programming

FAST: fast architecture sensitive tree search on modern CPUs and GPUs

Changkyu Kim, Jatin Chhugani, Nadathur Satish, Eric Sedlar, Anthony D. Nguyen, Tim Kaldewey, Victor W. Lee, Scott A. Brandt, Pradeep Dubey

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Tags: Algorithms, Computer science, Databases, nVidia, nVidia GeForce GTX 280, Performance

November 17, 2010 by hgpu

Scalable parallel programming with CUDA

John Nickolls, Ian Buck, Michael Garland, Kevin Skadron

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Tags: Computer science, CUDA, nVidia, Programming techniques, Review

November 17, 2010 by hgpu

Fast free-form deformation using graphics processing units

Marc Modat, Gerard R. Ridgway, Zeike A. Taylor, Manja Lehmann, Josephine Barnes, David J. Hawkes, Nick C. Fox, Sebastien Ourselin

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Tags: Biology, CUDA, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTX, Package

November 17, 2010 by hgpu

permGPU: Using graphics processing units in RNA microarray association studies

Ivo Shterev, Sin H. Jung, Stephen George, Kouros Owzar

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Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 280, Package, RNA

November 17, 2010 by hgpu

Accelerating Collapsed Variational Bayesian Inference for Latent Dirichlet Allocation with Nvidia CUDA Compatible Devices

Tomonari Masada, Tsuyoshi Hamada, Yuichiro Shibata, Kiyoshi Oguri

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Tags: Computer science, CUDA, Latent Dirichlet allocation, nVidia, nVidia GeForce GTX 260

November 17, 2010 by hgpu

Accelerating simultaneous algebraic reconstruction technique with motion compensation using CUDA-enabled GPU

Wai-Man Pang, Jing Qin, Yuqiang Lu, Yongming Xie, Chee-Kong Chui, Pheng-Ann Heng

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Tags: Computed tomography, CT, CUDA, Image reconstruction, Medicine, Motion compensation, nVidia, nVidia GeForce 8800 GTX

November 17, 2010 by hgpu

Eye-Full Tower: A GPU-based variable multibaseline omnidirectional stereovision system with automatic baseline selection for outdoor mobile robot navigation

Wen L. Lui, Ray Jarvis

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce 8800 M GTX

November 17, 2010 by hgpu

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

Stanimire Tomov, Rajib Nath, Jack Dongarra

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Tags: BLAS, Computer science, CUBLAS, CUDA, Linear Algebra, nVidia, nVidia GeForce GTX 280, Package

November 17, 2010 by hgpu

A multi-GPU accelerated solver for the three-dimensional two-phase incompressible Navier-Stokes equations

Michael Griebel, Peter Zaspel

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Tags: CUDA, Fluid dynamics, MPI, Navier-Stokes equations, NSEs, nVidia, Tesla S1070

November 17, 2010 by hgpu

Domain Decomposition method on GPU cluster

Yusuke Osaki, Ken-Ichi Ishikawa

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Tags: CUDA, GPU cluster, High Energy Physics - Lattice, Mathematical Software, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, OpenMPI, Physics, QCD

November 16, 2010 by hgpu

Real-time nonlinear finite element computations on GPU – Application to neurosurgical simulation

Grand R. Joldes, Adam Wittek, Karol Miller

Tags: CUDA, Medicine, nVidia, Surgical simulation

November 16, 2010 by hgpu

Development of a GPU-based High-Performance Radiative Transfer Model for the Infrared Atmospheric Sounding Interferometer (IASI)

Bormin Huang, Jarno Mielikainen, Hyunjong Oh, Hung-Lung A. Huang

Tags: CUDA, Earth and Space Sciences, nVidia

November 16, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

FAST: fast architecture sensitive tree search on modern CPUs and GPUs

Scalable parallel programming with CUDA

Fast free-form deformation using graphics processing units

permGPU: Using graphics processing units in RNA microarray association studies

Accelerating Collapsed Variational Bayesian Inference for Latent Dirichlet Allocation with Nvidia CUDA Compatible Devices

Accelerating simultaneous algebraic reconstruction technique with motion compensation using CUDA-enabled GPU

Eye-Full Tower: A GPU-based variable multibaseline omnidirectional stereovision system with automatic baseline selection for outdoor mobile robot navigation

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

A multi-GPU accelerated solver for the three-dimensional two-phase incompressible Navier-Stokes equations

Domain Decomposition method on GPU cluster

Real-time nonlinear finite element computations on GPU – Application to neurosurgical simulation

Development of a GPU-based High-Performance Radiative Transfer Model for the Infrared Atmospheric Sounding Interferometer (IASI)

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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