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GPU-RMAP: Accelerating Short-Read Mapping on Graphics Processors

Ashwin M. Aji, Liqing Zhang, Wu C. Feng

Tags: Bioinformatics, Biology, Next-Generation sequencing, nVidia

March 9, 2011 by hgpu

Monte Carlo randomization tests for large-scale abundance datasets on the GPU

John L. Van Hemert, Julie A. Dickerson

Tags: Bioinformatics, Biology, CUDA, Medicine, Metabolomics, Monte Carlo simulation, Next-Generation sequencing, nVidia

November 8, 2010 by hgpu

KernelBenchX: A Comprehensive Benchmark for Evaluating LLM-Generated GPU Kernels

KernelBenchX: A Comprehensive Benchmark for Evaluating LLM-Generated GPU Kernels

CUDA Kernel Fusion Benchmarks

Analyzing the Impact of Kernel Fusion on GPU Tensor Operation Performance: A Systematic Performance Study

IntelliKit: Agent-first tooling for AMD hardware

Kerncap: Automated Kernel Extraction and Isolation for AMD GPUs

DITRON: Distributed Compiler based on Triton for Parallel Systems

DITRON: Distributed Multi-level Tiling Compiler for Parallel Tensor Programs

CuTile Benchmark Suite: Performance and Productivity Tradeoffs for GPU Kernel Programming on Blackwell Architecture

Evaluating CUDA Tile for AI Workloads on Hopper and Blackwell GPUs

MegaTrain: Full Precision Training of 100B+ Parameter Large Language Models on a Single GPU

MegaTrain: Full Precision Training of 100B+ Parameter Large Language Models on a Single GPU

Device Virtual Machine (DVM)

DVM: Real-Time Kernel Generation for Dynamic AI Models

Agentic Code Optimization via Compiler-LLM Cooperation

Agentic Code Optimization via Compiler-LLM Cooperation

AutoKernel: Autoresearch for GPU kernels. Give it any PyTorch model, go to sleep, wake up to optimized Triton kernels

AutoKernel: Autonomous GPU Kernel Optimization via Iterative Agent-Driven Search

SOL-ExecBench: Speed-of-Light Benchmarking for Real-World GPU Kernels Against Hardware Limits

SOL-ExecBench: Speed-of-Light Benchmarking for Real-World GPU Kernels Against Hardware Limits

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