high performance computing on graphics processing units: hgpu.org

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Accelerating non-linear image registration with GPUs

Paul Ross

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Tags: CUDA, Image processing, Image registration, nVidia, Tesla C2050, Thesis

December 12, 2011 by hgpu

Gyrokinetic Toroidal Simulations on Leading Multi-and Manycore HPC Systems

Kamesh Madduri, Khaled Z. Ibrahim, Samuel Williams, Eun-Jin Im, Stephane Ethier, John Shalf, Leonid Oliker

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Tags: CUDA, Fortran, Hybrid computing, MPI, nVidia, OpenMP, Optimization, Particle-in-cell methods, Physics, Plasma physics, Tesla C2050

December 11, 2011 by hgpu

Achieving High Throughput Sequencing with Graphics Processing Units

Su Chen, Chaochao Zhang, Feng Shen, Ling Bai, Hai Jiang, Damir Herman

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Tags: Algorithms, Bioinformatics, Computer science, CUDA, nVidia, Sequence alignment, Tesla C2050

December 10, 2011 by hgpu

Multi-Science Applications with Single Codebase – GAMER – for Massively Parallel Architectures

Hemant Shukla, Hsi-Yu Schive, Tak-Pong Woo, Tzihong Chiueh

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Tags: Algorithms, Astrophysics, Benchmarking, CUDA, Differential equations, nVidia, Partial differential equations, PDEs, Physics, Rendering, Tesla C2050

December 10, 2011 by hgpu

Performance of PETSc GPU Implementation with Sparse Matrix Storage Schemes

Pramod Kumbhar

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Tags: ATI, ATI FireStream, Computer science, CUDA, Differential equations, GPU cluster, nVidia, OpenCL, Partial differential equations, PDEs, Sparse matrix, Tesla C2050, Thesis

December 8, 2011 by hgpu

GPU Implementation of the Keccak Hash Function Family

Pierre-Louis Cayrel, Gerhard Hoffmann, Michael Schneider

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce GTX 295, Package, Security, Tesla C2050

December 7, 2011 by hgpu

GPU-based solution of Continuous Time Markov Chains using CUSP

Nicholas Dingle

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Tags: CUDA, Mathematics, nVidia, Probability, Tesla C2050

December 7, 2011 by hgpu

Soft Error Resilient QR Factorization for Hybrid System with GPGPU

Peng Du, Piotr Luszczek, Stan Tomov, Jack Dongarra

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Tags: Algorithms, Computer science, CUDA, Factorization, Hybrid computing, nVidia, Tesla C2050, Tesla M2070

December 5, 2011 by hgpu

Parallel Quadtree Coding of Large-Scale Raster Geospatial Data on GPGPUs

Jianting Zhang, Simin You, Le Gruenwald

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Tags: CUDA, Data parallelism, Earth and Space Sciences, Geoscience, nVidia, Sensing, Tesla C2050

December 5, 2011 by hgpu

Communication-avoiding QR decomposition for GPUs

Michael Anderson, Grey Ballard, James Demmel, Kurt Keutzer

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Tags: Algorithms, Computer science, Factorization, Linear Algebra, nVidia, nVidia GeForce GTX 480, Tesla C2050

December 4, 2011 by hgpu

Global Point Mascon Models for Simple, Accurate and Parallel Geopotential Computation

Ryan P. Russell, Nitin Arora

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Tags: Earth and Space Sciences, Geoscience, nVidia, nVidia GeForce GTX 465, Tesla C2050

December 4, 2011 by hgpu

Programming hybrid systems with implicit memory based synchronization

Jens Breitbart

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Tags: Algorithms, Computer science, CUDA, Hybrid computing, nVidia, nVidia GeForce GTX 480, Package, Tesla C2050

December 3, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Accelerating non-linear image registration with GPUs

Gyrokinetic Toroidal Simulations on Leading Multi-and Manycore HPC Systems

Achieving High Throughput Sequencing with Graphics Processing Units

Multi-Science Applications with Single Codebase – GAMER – for Massively Parallel Architectures

Performance of PETSc GPU Implementation with Sparse Matrix Storage Schemes

GPU Implementation of the Keccak Hash Function Family

GPU-based solution of Continuous Time Markov Chains using CUSP

Soft Error Resilient QR Factorization for Hybrid System with GPGPU

Parallel Quadtree Coding of Large-Scale Raster Geospatial Data on GPGPUs

Communication-avoiding QR decomposition for GPUs

Global Point Mascon Models for Simple, Accurate and Parallel Geopotential Computation

Programming hybrid systems with implicit memory based synchronization

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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