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Optimization of Molecular Dynamics Simulation Code and Applications to Biomolecular Systems

David M. Bowman

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Tags: Biochemistry, Biomolecules, Chemistry, CUDA, Molecular dynamics, MPI, nVidia, OpenCL, OpenMP, Thesis

March 1, 2016 by hgpu

Automatic and portable mapping of data parallel programs to OpenCL for GPU-based heterogeneous systems

Zheng Wang, Dominik Grewe, Michael F.P. O'Boyle

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Tags: ATI, ATI Radeon HD 7970, Code generation, Compilers, Computer science, Heterogeneous systems, Machine learning, nVidia, nVidia GeForce GTX 580, OpenCL, OpenMP, Performance

February 19, 2016 by hgpu

High performance high-order numerical methods: applications in ocean modeling

Rajesh Gandham

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Tags: ATI, ATI Radeon HD 7970, cfd, Computer science, CUDA, Fluid dynamics, Numerical simulation, nVidia, nVidia GeForce GTX Titan, OCCA, OpenCL, OpenMP, real time systems, Tesla C2050, Tesla K20, Tesla K40, Thesis

February 8, 2016 by hgpu

Optimization and Large Scale Computation of an Entropy-Based Moment Closure

C. Kristopher Garrett, Cory Hauck, Judith Hill

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Tags: Algorithms, CUDA, Heterogeneous systems, nVidia, OpenMP, Physics, Tesla K20

February 3, 2016 by hgpu

Extracting Flow Features Using Bag-of-Features and Supervised Learning Techniques

Yifei Li

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Source codes

Tags: Algorithms, Clustering, Computer science, Computer vision, CUDA, Machine learning, nVidia, nVidia GeForce GTX 580, OpenMP, Package, Thesis, Visualization

February 2, 2016 by hgpu

High-Performance Tensor Contractions for GPUs

A. Abdelfattah, M. Baboulin, V. Dobrev, J. Dongarra, C. Earl, J. Falcou, A. Haidar, I. Karlin, Tz. Kolev, I. Masliah, S. Tomov

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Tags: Algorithms, Code generation, Computer science, CUDA, FEM, Finite element method, Linear Algebra, Matrix multiplication, nVidia, OpenMP, Tesla K40

January 29, 2016 by hgpu

Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units

Mohammed Abdelrahim

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Tags: Computer science, CUDA, Heterogeneous systems, LSTM, Machine learning, nVidia, nVidia GeForce GTX 770, OpenMP, Thesis

January 19, 2016 by hgpu

Real-Time Dedispersion for Fast Radio Transient Surveys, using Auto Tuning on Many-Core Accelerators

Alessio Sclocco, Joeri van Leeuwen, Henri E. Bal, Rob V. van Nieuwpoort

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Source codes

Tags: Astrophysics, ATI, ATI Radeon HD 7970, Instrumentation and Methods for Astrophysics, Intel Xeon Phi, nVidia, nVidia GeForce GTX 680, nVidia GeForce Titan, OpenCL, OpenMP, Package, Tesla K20

January 12, 2016 by hgpu

Parallel 3D Fast Wavelet Transform comparison on CPUs and GPUs

Gregorio Bernabe

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Tags: Computer science, CUDA, FFT, nVidia, OpenCL, OpenMP, Pthreads, Tesla C2050

December 31, 2015 by hgpu

Challenges Adapting CUDA PIC Codes to multiple GPUs

Olav Emil Eiksund

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Tags: Benchmarking, CUDA, Electrostatics, FFT, nVidia, nVidia GeForce GTX 980, OpenMP, Particle simulation, Particle-in-cell methods, Physics, Plasma physics, Tesla K20, Thesis

December 19, 2015 by hgpu

Run-time support for multi-level disjoint memory address spaces

Javier Bueno Hedo

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Tags: Computer science, CUDA, MPI, nVidia, nVidia GeForce GTX 480, OmpSs, OpenMP, Thesis

December 15, 2015 by hgpu

Transforming C OpenMP Programs for Verification in CIVL

Michael Rogers

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Tags: Computer science, CUDA, MPI, nVidia, OpenCL, OpenMP, Pthreads, Thesis

December 10, 2015 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

Optimization of Molecular Dynamics Simulation Code and Applications to Biomolecular Systems

Automatic and portable mapping of data parallel programs to OpenCL for GPU-based heterogeneous systems

High performance high-order numerical methods: applications in ocean modeling

Optimization and Large Scale Computation of an Entropy-Based Moment Closure

Extracting Flow Features Using Bag-of-Features and Supervised Learning Techniques

High-Performance Tensor Contractions for GPUs

Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units

Real-Time Dedispersion for Fast Radio Transient Surveys, using Auto Tuning on Many-Core Accelerators

Parallel 3D Fast Wavelet Transform comparison on CPUs and GPUs

Challenges Adapting CUDA PIC Codes to multiple GPUs

Run-time support for multi-level disjoint memory address spaces

Transforming C OpenMP Programs for Verification in CIVL

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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