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Explorations of the Viability of ARM and Xeon Phi for Physics Processing

David Abdurachmanov, Kapil Arya, Josh Bendavid, Tommaso Boccali, Gene Cooperman, Andrea Dotti, Peter Elmer, Giulio Eulisse, Francesco Giacomini, Christopher D. Jones, Matteo Manzali, Shahzad Muzaffar

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Tags: ARM, Computational Physics, High Energy Physics - Experiment, Intel Phi, Intel Xeon Phi, Performance, Physics

November 11, 2013 by hgpu

Accelerating Dissipative Particle Dynamics Simulations on GPUs: Algorithms, Numerics and Applications

Yu-Hang Tang, George Em Karniadakis

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Tags: Algorithms, Computational Physics, Computer science, CUDA, MPI, nVidia, Tesla K20

November 6, 2013 by hgpu

Performance of Kepler GTX Titan GPUs and Xeon Phi System

Hwancheol Jeong, Weonjong Lee, Jeonghwan Pak, Kwang-jong Choi, Sang-Hyun Park, Jun-sik Yoo, Joo Hwan Kim, Joungjin Lee, Young Woo Lee

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Tags: Computational Physics, CUDA, Intel Phi, Intel Xeon Phi, nVidia, nVidia GeForce GTX Titan, Performance, Physics, Tesla K20

November 6, 2013 by hgpu

Use of Checkpoint-Restart for Complex HEP Software on Traditional Architectures and Intel MIC

Kapil Arya, Gene Cooperman, Andrea Dotti, Peter Elmer

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Tags: Computational Physics, High Energy Physics - Experiment, Intel Phi, Intel Xeon Phi, Numerical Analysis, Physics

November 4, 2013 by hgpu

Initial Explorations of ARM Processors for Scientific Computing

David Abdurachmanov, Peter Elmer, Giulio Eulisse, Shahzad Muzaffar

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Tags: ARM, Computational Physics, Energy-efficient computing, High Energy Physics - Experiment, Numerical Analysis, Physics

November 4, 2013 by hgpu

The Plasma Simulation Code: A modern particle-in-cell code with load-balancing and GPU support

Kai Germaschewski, William Fox, Narges Ahmadi, Liang Wang, Stephen Abbott, Hartmut Ruhl, Amitava Bhattacharjee

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Tags: Computational Physics, CUDA, nVidia, Particle-in-cell methods, Physics, Plasma physics, Tesla C1060, Tesla K20

October 30, 2013 by hgpu

First Evaluation of the CPU, GPGPU and MIC Architectures for Real Time Particle Tracking based on Hough Transform at the LHC

V. Halyo, P. LeGresley, P. Lujan, V. Karpusenko, A. Vladimirov

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Tags: Algorithms, Computational Physics, CUDA, High Energy Physics - Experiment, Intel Phi, Intel Xeon Phi, nVidia, Physics, Tesla K20

October 29, 2013 by hgpu

Fast distributed phononic band-structure calculations through a GPU accelerated mixed-variational formulation

Ankit Srivastava

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Tags: Algorithms, Computational Physics, Condensed matter, CUDA, FDTD, Finite-difference time-domain, Materials Science, nVidia, nVidia Quadro K 2000

October 29, 2013 by hgpu

GALAMOST: GPU-accelerated large-scale molecular simulation toolkit

You-Liang Zhu, Hong Liu, Zhan-Wei Li, Hu-Jun Qian, Giuseppe Milano, Zhong-Yuan Lu

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Tags: Chemical Physics, Computational Physics, CUDA, Molecular simulation, nVidia, nVidia GeForce GTX 580, Phase transition, Physics, Soft Condensed Matter, Tesla K20

October 10, 2013 by hgpu

Porting Large HPC Applications to GPU Clusters: The Codes GENE and VERTEX

Tilman Dannert, Andreas Marek, Markus Rampp

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Tags: Computational Physics, CUDA, GPU cluster, Heterogeneous systems, nVidia, PC cluster, Physics, Plasma physics, Solar and Stellar Astrophysics, Tesla K20

October 8, 2013 by hgpu

A graphics processor-based intranuclear cascade and evaporation simulation

H. Wan Chan Tseung, C. Beltran

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Tags: Computational Physics, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 680, Physics

October 2, 2013 by hgpu

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Christopher D. Cooper, Jaydeep P. Bardhan, L. A. Barba

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Source codes

Tags: Biomolecules, Boltzmann equation, Computational Physics, CUDA, Electrostatics, Intel Phi, nVidia, Package, Physics, Poisson Boltzmann, Python, Tesla C2075

September 17, 2013 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

Explorations of the Viability of ARM and Xeon Phi for Physics Processing

Accelerating Dissipative Particle Dynamics Simulations on GPUs: Algorithms, Numerics and Applications

Performance of Kepler GTX Titan GPUs and Xeon Phi System

Use of Checkpoint-Restart for Complex HEP Software on Traditional Architectures and Intel MIC

Initial Explorations of ARM Processors for Scientific Computing

The Plasma Simulation Code: A modern particle-in-cell code with load-balancing and GPU support

First Evaluation of the CPU, GPGPU and MIC Architectures for Real Time Particle Tracking based on Hough Transform at the LHC

Fast distributed phononic band-structure calculations through a GPU accelerated mixed-variational formulation

GALAMOST: GPU-accelerated large-scale molecular simulation toolkit

Porting Large HPC Applications to GPU Clusters: The Codes GENE and VERTEX

A graphics processor-based intranuclear cascade and evaporation simulation

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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